Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00758 ATGGGAAGGTCCCCTTGCTGTGACGATGATGGCCTTAAGAAAGGACCCTGGACTCCTGAGGAAGACCAAAAGCTAGTCCAGTACATTCAGAAACAGGGCCATGGAAGTTGGAGAGCCCTTCCAAAGCTAGCAGGTCTTAACAGATGTGGAAAAAGCTGTAGGTTAAGGTGGACTAACTATTTAAGGCCTGATATCAAGAGGGGCAAATTTTCTCAAGAAGAGGAGCAAACAATTCTTCATCTCCATTCCATCCTCGGAAACAAATGGTCAGCAATTGCTTCTCATCTTCCCGGAAGAACAGACAATGAGATAAAGAATTTCTGGAATACCCATTTAAAGAAGAAGTTGATTCAGATGGGTTTTGATCCAATGACACATCAGCCAAGAACTGATCTTGTTTCGAGCTTGCCTTATCTGCTAGCTTTGGCCAACATGACAGAACTTATAGAATATCAATCATTGGATGAACAGGCTGTGAGATTTCAAGCAGAGACTGCTCAGTTGGCCAAGCTTCAGTACCTTCAATATTTACTCCAAAACACAACTTCCTTATCTACCAACTCCCATGACCAAACTGCTATCACAAACACGGAAGCATTCAATTTAGTAAATCCATTCCCAAATGTCAATGAGAACTCAGTTGTAAACTACCCACCTCGAGTGGATAATCCTGCAGCCTCATTCTCTCATGGGATTGCTAGCTCCCAACCACTCCACCATCCAAGCTCATTACCTCACTTTTCAGACCCACAAGTCCCTTTCAGCTCCCAAACATGTTTGAATAGCGAGACAGGTCAAGGTACTAACTTTACGATGCTAAGTCAAGGGGATCAAACAGCTAATGATGATTCTTCATGGGTTATCCCATCATCTCCTTCTAGACCCCCAACTGTGACAGGAACCTCAACAAGCAACCCAGGAGATGCCAGCAGCACTACTTCTAGCTATGGAGGAGGAGCCTCATCCTATTGGCCTGACTTTCTTTTCGAAGACCCTATTATGCATGAGCTTTCTTAA 1017 0.4395 MGRSPCCDDDGLKKGPWTPEEDQKLVQYIQKQGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILHLHSILGNKWSAIASHLPGRTDNEIKNFWNTHLKKKLIQMGFDPMTHQPRTDLVSSLPYLLALANMTELIEYQSLDEQAVRFQAETAQLAKLQYLQYLLQNTTSLSTNSHDQTAITNTEAFNLVNPFPNVNENSVVNYPPRVDNPAASFSHGIASSQPLHHPSSLPHFSDPQVPFSSQTCLNSETGQGTNFTMLSQGDQTANDDSSWVIPSSPSRPPTVTGTSTSNPGDASSTTSSYGGGASSYWPDFLFEDPIMHELS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00758 338 CDD SANT 69 112 IPR001005 -
Bach12g00758 338 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bach12g00758 338 MobiDBLite consensus disorder prediction 227 318 - -
Bach12g00758 338 FunFam MYB-related transcription factor 13 66 - -
Bach12g00758 338 CDD SANT 16 61 IPR001005 -
Bach12g00758 338 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bach12g00758 338 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 251 - -
Bach12g00758 338 Gene3D - 13 66 - -
Bach12g00758 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bach12g00758 338 FunFam Transcription factor MYB39 69 130 - -
Bach12g00758 338 SMART sant 66 114 IPR001005 -
Bach12g00758 338 SMART sant 13 63 IPR001005 -
Bach12g00758 338 MobiDBLite consensus disorder prediction 228 318 - -
Bach12g00758 338 Gene3D - 69 116 - -
Bach12g00758 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bach12g00758 338 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bach12g00758 338 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bach12g00758 338 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00758 Bach-Chr12 5287152 5288572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00758 1 338 MYB Transcription Factor Family AT1G34670 56.369 4.87e-126 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach12g00758 Myb_DNA-binding 4.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00758 K09422 - gmx:100811162 507.679