Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00748 ATGGCTTACCCACATTTCCGATCACAGTTTGGGGACACAACTTTTACCAAAGTGTTTGTCGGAGGACTTGCTTGGGAGACACCCAATGAAGTAATGCGTAAATATTTCGAGCAGTTCGGAGATATTCTTGAGGCTGTCATCATCACTGATAAGAACACAGGAAAATCTAAAGGCTATGGATTCGTAACTTTCCGTGATCCAGAATCAGCAAGAAGAGCTTGTGCTGATCCAAACCCAGTAATAGATGGTAGACGAGCAAATTGCAATATTGCTTCTCTCAGAAGGCCTCGACCTTCACCACCCCGAGCTGGTGGGAGTAGCAGCTATCAAGGAGGAACATCACGGAGTACCGCGTCGTATGGTGGTGTTCCGGCAGCAGTACCTCCGCCACTGCCACCGCCACCACCTCTAATGTACCCAAGTTACAGCTACCCAACCTACGCTCCAGATTATGGGTACCACCAAGCCCCATTGTACAACCCCCAGATGCAGCAGGCACAATACTATCAGCAAGTTTACGGACCATCATCTCCTACAATGGGATCACCTTATTACTATGGTTATTCAGTACAAGCAGCAACAAGGGGCACATTTTCTACACCCCAACCACATCGCCTACCAGCTGGACCGTCCTATATATACTACCCTACAACACCCATGGAAGGCTCCTTCTCTACTTATCGTCCACCCCAACCATCAAGACGAAGCTATCCCTTTCCCTCCCCTACTGCTACTGACTCACAGCCTCAGCAGCGTACCTCCTCAGAAACAACAGCTGGTGTAGTTGTAACTTCAGAAAGTTCAAATACGCAAGGGAACAACTAA 825 0.4836 MAYPHFRSQFGDTTFTKVFVGGLAWETPNEVMRKYFEQFGDILEAVIITDKNTGKSKGYGFVTFRDPESARRACADPNPVIDGRRANCNIASLRRPRPSPPRAGGSSSYQGGTSRSTASYGGVPAAVPPPLPPPPPLMYPSYSYPTYAPDYGYHQAPLYNPQMQQAQYYQQVYGPSSPTMGSPYYYGYSVQAATRGTFSTPQPHRLPAGPSYIYYPTTPMEGSFSTYRPPQPSRRSYPFPSPTATDSQPQQRTSSETTAGVVVTSESSNTQGNN 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00748 274 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 75 IPR000504 GO:0003723
Bach12g00748 274 SUPERFAMILY RNA-binding domain, RBD 9 121 IPR035979 GO:0003676
Bach12g00748 274 SMART rrm1_1 17 89 IPR000504 GO:0003723
Bach12g00748 274 MobiDBLite consensus disorder prediction 90 127 - -
Bach12g00748 274 Gene3D - 3 112 IPR012677 -
Bach12g00748 274 MobiDBLite consensus disorder prediction 223 274 - -
Bach12g00748 274 PANTHER BOULE-RELATED 7 255 - -
Bach12g00748 274 MobiDBLite consensus disorder prediction 103 120 - -
Bach12g00748 274 CDD RRM_RBM24_RBM38_like 16 91 - -
Bach12g00748 274 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 93 IPR000504 GO:0003723
Bach12g00748 274 FunFam RNA-binding protein 24-B isoform X1 3 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00748 Bach-Chr12 5214076 5217487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00748 12 104 C2H2 Transcription Factor Family AT2G19380 37.634 6.24e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00748 K25006 - gmx:100787086 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01651 3 25250974 25254090 Bach12g00748 12 5214076 5217487 BWGD
Bach12g00748 12 5214076 5217487 Bach12g00748 12 5214076 5217487 ECH