Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bach12g00748 | ATGGCTTACCCACATTTCCGATCACAGTTTGGGGACACAACTTTTACCAAAGTGTTTGTCGGAGGACTTGCTTGGGAGACACCCAATGAAGTAATGCGTAAATATTTCGAGCAGTTCGGAGATATTCTTGAGGCTGTCATCATCACTGATAAGAACACAGGAAAATCTAAAGGCTATGGATTCGTAACTTTCCGTGATCCAGAATCAGCAAGAAGAGCTTGTGCTGATCCAAACCCAGTAATAGATGGTAGACGAGCAAATTGCAATATTGCTTCTCTCAGAAGGCCTCGACCTTCACCACCCCGAGCTGGTGGGAGTAGCAGCTATCAAGGAGGAACATCACGGAGTACCGCGTCGTATGGTGGTGTTCCGGCAGCAGTACCTCCGCCACTGCCACCGCCACCACCTCTAATGTACCCAAGTTACAGCTACCCAACCTACGCTCCAGATTATGGGTACCACCAAGCCCCATTGTACAACCCCCAGATGCAGCAGGCACAATACTATCAGCAAGTTTACGGACCATCATCTCCTACAATGGGATCACCTTATTACTATGGTTATTCAGTACAAGCAGCAACAAGGGGCACATTTTCTACACCCCAACCACATCGCCTACCAGCTGGACCGTCCTATATATACTACCCTACAACACCCATGGAAGGCTCCTTCTCTACTTATCGTCCACCCCAACCATCAAGACGAAGCTATCCCTTTCCCTCCCCTACTGCTACTGACTCACAGCCTCAGCAGCGTACCTCCTCAGAAACAACAGCTGGTGTAGTTGTAACTTCAGAAAGTTCAAATACGCAAGGGAACAACTAA | 825 | 0.4836 | MAYPHFRSQFGDTTFTKVFVGGLAWETPNEVMRKYFEQFGDILEAVIITDKNTGKSKGYGFVTFRDPESARRACADPNPVIDGRRANCNIASLRRPRPSPPRAGGSSSYQGGTSRSTASYGGVPAAVPPPLPPPPPLMYPSYSYPTYAPDYGYHQAPLYNPQMQQAQYYQQVYGPSSPTMGSPYYYGYSVQAATRGTFSTPQPHRLPAGPSYIYYPTTPMEGSFSTYRPPQPSRRSYPFPSPTATDSQPQQRTSSETTAGVVVTSESSNTQGNN | 274 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bach12g00748 | 274 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 18 | 75 | IPR000504 | GO:0003723 | |
Bach12g00748 | 274 | SUPERFAMILY | RNA-binding domain, RBD | 9 | 121 | IPR035979 | GO:0003676 | |
Bach12g00748 | 274 | SMART | rrm1_1 | 17 | 89 | IPR000504 | GO:0003723 | |
Bach12g00748 | 274 | MobiDBLite | consensus disorder prediction | 90 | 127 | - | - | |
Bach12g00748 | 274 | Gene3D | - | 3 | 112 | IPR012677 | - | |
Bach12g00748 | 274 | MobiDBLite | consensus disorder prediction | 223 | 274 | - | - | |
Bach12g00748 | 274 | PANTHER | BOULE-RELATED | 7 | 255 | - | - | |
Bach12g00748 | 274 | MobiDBLite | consensus disorder prediction | 103 | 120 | - | - | |
Bach12g00748 | 274 | CDD | RRM_RBM24_RBM38_like | 16 | 91 | - | - | |
Bach12g00748 | 274 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 16 | 93 | IPR000504 | GO:0003723 | |
Bach12g00748 | 274 | FunFam | RNA-binding protein 24-B isoform X1 | 3 | 113 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bach12g00748 | Bach-Chr12 | 5214076 | 5217487 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bach12g00748 | 12 | 104 | C2H2 Transcription Factor Family | AT2G19380 | 37.634 | 6.24e-15 | 72.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bach12g00748 | K25006 | - | gmx:100787086 | 381.333 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bach3g01651 | 3 | 25250974 | 25254090 | Bach12g00748 | 12 | 5214076 | 5217487 | BWGD | |
Bach12g00748 | 12 | 5214076 | 5217487 | Bach12g00748 | 12 | 5214076 | 5217487 | ECH |