Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00740 ATGGATAATTCTTTGTCGGAGACAACGGAAGCACCCAGAGATCGCAGAGCAAACGCTCTTGGAGACCTTCGAGTCCTTCCCGATGAAATCCTCTGCGAAATTTTTGAACGTCTCTCTCCTCGAGACGTTGCTCGCCTCGCTTGTTTGAAGTTTTCAGTTCCATATAGTTCATCTAGCTGTCTTTTACATTTTGAGGGGAATATTGATCGAGTGAGAATTTGCAAGATAAGTGCAAAGAGGACCAGAGACAAAGTTTTCATTTCGATGGATTCAACTCGTTATTTTTGTACCGAAGATTATATAGGTGCCATACCACTTTTAGATGGATTTTATGCAGATGATGGAAATGTGGAAAGAAGGAAAGGCATCTCCCTGAAAGACTTTTATGATGAGTATGACAGCAAGAAGCCGTTCACAAATTCTGAATTACTAACGGTTTGCTTTTTGTTGAAATGGGATATTGATGAATATTACATCCCAGCTTTTAAGATTTCTCAAAGGAGTTACCGGAAGGTTAAGATAAAGCTAAAGGATTACTTTGTGCCTCATCTGTTTGAAGAAGACTATTTTGATGTCTTAGATACTGATAAGCGGCCATCCTATAGGTGGCTCATAATTGGGCCTGAGAGATCTGGAGCATCGTGGCATTTTGATCCTGCTCTAACCGGTGCATGGAATACTCTTCTTTCTGGCCGTAAAAGATGGGCATTATATCCTCCAGGAAAGGTGCCCTTGGGTGTTACAGTTCATGTTAATGAAGAAGATGGTGATGTCAGCATTGATACCCCATCATCACTGCACTGGTGGCTAGACTTTTATCCACTTCTCGCTGATGAAGACAAGCCAATTGAGTGTACACAATTACCTGGAGAGACAATTTATGTTCCAAGTGGATGGTGGCACTGTGTTCTAAATTTGGAGACAACTATTGCTGTCACACAGAATTTTGTAAATTCTAATAACTTTGAATTTATTTTTCAATTAAAGAAAAGGGTCCCAGAACTCAAAAATGGAGATGATGTAAATTATGAAAGAAACATAAACGGTTCATCCAGAATCCATAATTTATGGAAAGATGGAATTTTTTATGATACAAGTTTCTTATCCACGTTTTTAGATAGGGACCACTATAGTTCTCCTTGGAGCTCAGGCAACTGCATTGGACAACGAGAACTAAGAGAATGGTTATCCAAGCTATGGATCGGAAAACCAGGAATGAGAGAGCTAATATGGAAGGGGGCATGTCTTGCTCTAAATGCTGACAGGTGGTTAGAACGCCTAACAGAAATTTGTGCCTTCCACAACTTTCCCTGTCCCAGTAATGATGAAAGGCTTCCTGTTGGTACGGGTAGCAATCCTGTTTATCTCGTGGGGAATTCCGTTGTTAAGATTTTTGTTGAAGGAGGGTCGGAAGCTTCACTTTATGGCTTAGGCACGGAGCTAGAGTTTTATAGCCTGCTGTATGATGTCAACTCCCTTATTAGGAATCACATTCCTAATATTTTGGCTAGTGGTATTCTTTATCTTGAAGATGGGTCTTATACAAATGTGCCTTGGGATGGCAAAGGAGTTCCTGATTATGAGTATAGAAATGCTAGGACGCTATTAGATGGATCAAATAGTTCGGCAATTCACTCAAGCATATGGCCATATATTATAACGCAACGCTGCAAAGGGAAGATTTTTGCAGAGTTAAGAGACACGCTATCATCAGATGATACAAGAAACCTAGCTTCCTTCTTAGGAGAGCAGCTGCGCCAGCTTCATCTTTTTCCACATCCACTCTGA 1788 0.406 MDNSLSETTEAPRDRRANALGDLRVLPDEILCEIFERLSPRDVARLACLKFSVPYSSSSCLLHFEGNIDRVRICKISAKRTRDKVFISMDSTRYFCTEDYIGAIPLLDGFYADDGNVERRKGISLKDFYDEYDSKKPFTNSELLTVCFLLKWDIDEYYIPAFKISQRSYRKVKIKLKDYFVPHLFEEDYFDVLDTDKRPSYRWLIIGPERSGASWHFDPALTGAWNTLLSGRKRWALYPPGKVPLGVTVHVNEEDGDVSIDTPSSLHWWLDFYPLLADEDKPIECTQLPGETIYVPSGWWHCVLNLETTIAVTQNFVNSNNFEFIFQLKKRVPELKNGDDVNYERNINGSSRIHNLWKDGIFYDTSFLSTFLDRDHYSSPWSSGNCIGQRELREWLSKLWIGKPGMRELIWKGACLALNADRWLERLTEICAFHNFPCPSNDERLPVGTGSNPVYLVGNSVVKIFVEGGSEASLYGLGTELEFYSLLYDVNSLIRNHIPNILASGILYLEDGSYTNVPWDGKGVPDYEYRNARTLLDGSNSSAIHSSIWPYIITQRCKGKIFAELRDTLSSDDTRNLASFLGEQLRQLHLFPHPL 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00740 595 SUPERFAMILY F-box domain 15 48 IPR036047 GO:0005515
Bach12g00740 595 Pfam Cupin-like domain 203 320 IPR041667 -
Bach12g00740 595 SUPERFAMILY Clavaminate synthase-like 116 332 - -
Bach12g00740 595 ProSiteProfiles F-box domain profile. 20 47 IPR001810 GO:0005515
Bach12g00740 595 ProSiteProfiles JmjC domain profile. 170 333 IPR003347 -
Bach12g00740 595 Pfam F-box domain 26 48 IPR001810 GO:0005515
Bach12g00740 595 CDD F-box_SF 26 48 - -
Bach12g00740 595 SMART cupin_9 163 333 IPR003347 -
Bach12g00740 595 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 175 486 - -
Bach12g00740 595 Gene3D Cupin 78 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00740 Bach-Chr12 5171599 5176573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00740 8 594 Glycosyltransferase AT1G78280 49.229 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Bach12g00740 Cupin_8 1.3e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00740 - - gmx:100792541 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00740 12 5171599 5176573 Bach12g00740 12 5171599 5176573 ECH