Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00729 ATGGCAGTACTTCGTCATCTCTGCCTTTCTTCCCCATCGTACCTCTCCGCAGAAACACCTCTCTTATCTCTTCAAAGTCCTCGAAATCAATCCAATCATAGCAACAATCTCTCTTTTGGCCATCCACCCTCCTCGTTTCAATTTCCAGGTCTTTCCCTTGCGCACAGCCCCAACTTTAGGACCAAAGAAATCCGTAACTTCGATCTCAAATTCGCCTCTACCTCCCAAGAACAAGTGCTTGATTCTTCCCCTGCCAATGTTTCTGCTGAGACACAACATACCGAGGCAGCAAATGAAGAAATTTCTAAAACCAGATTACTGGCTTACAATGTACCTTGGACTAGTACTCCTGAAGACATTCGTTCTCTATTCGAGAGGCATGGAAAAGTCGTAGACGTTGAGCTTGCTATGTATAACAAGAACAGAAACAGAGGTTTGGCATTTATCGAAATGGGATCACCAGAAGAAGCTCTTGCAGCTCTCAATAATCTCCAATCGTATGAGTATGAGGGTCGCATAATAAGACTCAGATATGCTCTGTCCAAAAAGAAGAAAATTCCACCTCCTGTGCAACCGAAGCCAGTAACATATAACTTGTTTGTTGCAAATTTGTCCTTTGAAGCGAGGTCAAGACATCTCAAGGAGTTTTTTGAGTCAGGAAGCAGTGGTGTTGTTTCTGCGGAGATTATATTTCATGATAACCCTAAAAGGTCATCTGGGTATGGATTTGTATCCTTCAAATCCAAGAAAGAAGCTGACACAGCTCTTTCTGAATTCCAAGGGAAGATTTTTATGGGAAGGCGACTCAGGGTGGCACGTAGTCGGCAATCCGTTAAACAACCAATAGAAGAGAATGCAGGTCCTGAAGTTGCATCACCTGAGCTGAATGCAAGTGGGGAAGAAGCCAATAATGCTGCTTGA 921 0.4354 MAVLRHLCLSSPSYLSAETPLLSLQSPRNQSNHSNNLSFGHPPSSFQFPGLSLAHSPNFRTKEIRNFDLKFASTSQEQVLDSSPANVSAETQHTEAANEEISKTRLLAYNVPWTSTPEDIRSLFERHGKVVDVELAMYNKNRNRGLAFIEMGSPEEALAALNNLQSYEYEGRIIRLRYALSKKKKIPPPVQPKPVTYNLFVANLSFEARSRHLKEFFESGSSGVVSAEIIFHDNPKRSSGYGFVSFKSKKEADTALSEFQGKIFMGRRLRVARSRQSVKQPIEENAGPEVASPELNASGEEANNAA 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00729 306 Gene3D - 60 187 IPR012677 -
Bach12g00729 306 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 197 276 IPR000504 GO:0003723
Bach12g00729 306 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 110 174 IPR000504 GO:0003723
Bach12g00729 306 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 199 270 IPR000504 GO:0003723
Bach12g00729 306 CDD RRM_SF 110 177 - -
Bach12g00729 306 SUPERFAMILY RNA-binding domain, RBD 104 273 IPR035979 GO:0003676
Bach12g00729 306 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 104 181 IPR000504 GO:0003723
Bach12g00729 306 MobiDBLite consensus disorder prediction 275 306 - -
Bach12g00729 306 CDD RRM_SF 199 271 - -
Bach12g00729 306 PANTHER OS02G0815200 PROTEIN 25 277 - -
Bach12g00729 306 Gene3D - 189 281 IPR012677 -
Bach12g00729 306 SMART rrm1_1 198 272 IPR000504 GO:0003723
Bach12g00729 306 SMART rrm1_1 105 177 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00729 Bach-Chr12 5117042 5118337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00729 96 293 Eukaryotic Initiation Factors Gene Family AT3G16380 28.311 3.17e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00729 - - qsa:O6P43_019606 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00729 12 5117042 5118337 Bach12g00729 12 5117042 5118337 ECH