Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00726 ATGACCATCCAGAATGGGAGTCGTGCCCCGACGATTCTCTGGCTCAGATTGTGGAGTTTTGATGATGGTTTCACGTGGTTTGCTATGTTTGTTCTTCTCCTACAGACATCACCCCCGGCAGCTGCGCAGCTTCCAAATGCGCTGTCACCCCCGCCACCAGAACCATTTTCGAGGCTTAAATTTGACAAATCCATGGCCATCATCATGGTGATCCTGGTGGTTGTCTTCTTCGTCTTGGGATTTCTTGCAGTCTACACTCGCCACTGTACCGAACGACGATTCCGAGGAAGACTTGACAATACAATCCCAATCGGTGGTAGTGGCCGACGATCGCGTAGGACGGCTCGTGGTCTAGACCCGGAGATCATCGAAACCTTTCCCACATTCGTCTACTCCACAGTAAAGGGGCTTAAGATTGGGAGAGGAACCTTAGAATGCGCCGTGTGCTTGAACGAGTTCCAAGATGACGAGACGCTGCGTTTAATCCCAAAATGCAACCATGTCTTCCATCCGGATTGTATAGACATTTGGTTGTCGTCTCACTCCACTTGCCCTGTTTGCAGGGCCAACCTTGTTCCCAAACCAGGGGAACTCTCGTTCGTGGCGATTCAGATTCCAGATCATAGTCCCGAACCCCACCGAGTAAGATCCGATTCTGAATTAGGACAACAAAATCCGGAGACAATTGAGGTTGGTGACAATTGGAACAGAGACGAAGAGTCTCCCAAGGTGAATTTACTTAACAGGAGTCAGACAACGAATCACAACCGGAACCAGCCACCTAGGTCAAGATCAACCGGGTTCTTATTCGGCAACTTATTTCCACGATCTCACTCGACAGGTCACTCGCTGGTTCAACCCGGCGAAAACTGTGAAAGATATACGCTGACGTTGCCGGACGAGGTAAGGAATCAATTACTGAACTCAACCTTGAACCGCACAAAAAGTTGCGTAACCTTTACTAGAGTGAGCAGCGAGAGGAGGGGTTACAGGACTAGAAGCTTGGGCAGCTGGCGTGGGAGAAATTATTTGCAGAACGACCGGTTCGGTAATGAAGGGCAGGCCAACCGGTGGGGGTTCACCTTGACGCCGCCGTCTTTTGCTAGAACCGTTTCAACGAAGTTCTCTGCGGGGTCTAAACAATCACCGTTCGATCGTTCCAGAATGGCAATGAACGACGTGGGTGAGCGATCCTCTGATCGATTATGCCCAGTTCCAGCAGCAGCATGTCTGGATTAA 1239 0.5036 MTIQNGSRAPTILWLRLWSFDDGFTWFAMFVLLLQTSPPAAAQLPNALSPPPPEPFSRLKFDKSMAIIMVILVVVFFVLGFLAVYTRHCTERRFRGRLDNTIPIGGSGRRSRRTARGLDPEIIETFPTFVYSTVKGLKIGRGTLECAVCLNEFQDDETLRLIPKCNHVFHPDCIDIWLSSHSTCPVCRANLVPKPGELSFVAIQIPDHSPEPHRVRSDSELGQQNPETIEVGDNWNRDEESPKVNLLNRSQTTNHNRNQPPRSRSTGFLFGNLFPRSHSTGHSLVQPGENCERYTLTLPDEVRNQLLNSTLNRTKSCVTFTRVSSERRGYRTRSLGSWRGRNYLQNDRFGNEGQANRWGFTLTPPSFARTVSTKFSAGSKQSPFDRSRMAMNDVGERSSDRLCPVPAAACLD 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00726 412 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 107 193 IPR013083 -
Bach12g00726 412 FunFam E3 ubiquitin-protein ligase ATL6 107 194 - -
Bach12g00726 412 Pfam Ring finger domain 145 188 IPR001841 -
Bach12g00726 412 SUPERFAMILY RING/U-box 140 196 - -
Bach12g00726 412 CDD RING-H2_EL5-like 145 188 - -
Bach12g00726 412 MobiDBLite consensus disorder prediction 209 240 - -
Bach12g00726 412 SMART ring_2 146 187 IPR001841 -
Bach12g00726 412 ProSiteProfiles Zinc finger RING-type profile. 146 188 IPR001841 -
Bach12g00726 412 PANTHER RING FINGER DOMAIN-CONTAINING 45 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00726 Bach-Chr12 5086903 5088141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00726 29 329 Rapid Response to Elicitors AT3G05200 43.548 4.06e-69 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00726 K10664 - qsa:O6P43_019600 429.869