Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00683 ATGTACGGTCAAGCTCAGGCAGTGAATATGCCTGCACAGATCGGCACCAGCGAAGACGACGATGGTTCAGGCGCGGGAGCCGAGTCGATTGAAAACCACCACATTCATTATGAACATGCTCTGGAAGATGTTAGCGGTGGAGTTGGTGGCGTCGTTGAAGATGTTACTTCCGATACTGTATATGCTAGTGCCGGCGCAAGTGATGCCAGCCAGCTTACTCTTTCGTTTCGTGGCCAAGTCTATGTCTTCGACTCTGTTACACCTGATCAGGTTCAAGCAGTATTGTTACGGTTGGGGGGTTGCGAACTATCCTCGGGTTTACAATGCGTGGACAGAGCGTCTCAAAATCAGAGGGGTGCAATGGATTATCCTGGGAGGTGTAGTCAACCGCAGCGAGCAGCATCATTAAGTAGGTTCCGTCAGAAGAGGAAAGAGCGATGCTTTGATAAGAAAGTTAGATATAGTGTACGTCAGGAAGTTGCGCTCAGGATGCACCGTAATAAGGGTCAATTTACTTCATCAAAAAAACCAGAAGGAGACAACAGTTGGGGTACTGCCCAGGAGTCAGGGCAGGATGAAAATCAATCAGAAACCTCATGCACGCATTGTGGCACAAGTTCAAAATCTACCCCAATGATGCGGAGAGGGCCATCTGGTCCAAGATCACTTTGCAATGCTTGTGGGCTTTTCTGGGCAAATAGGGGTACTTTGAGGGACCTTTCCAAGAGGAACCAGGAAAATTCTCTGCCACCAGTTGAGCAGGTTGATGGTGAAGGTAATGACTCGGACTGTCCAACTGCCTTCCCCGCACATAACAATCTTGTTACTTTCTCTGATAATGATAATAACCAAGCTATAACAGCTGATCAATGAGTTTTCTGGTCAGAGAAATTGCCATAGTAATTGCCTCTAAAATTAGTAGATTTTTAGTGATTTCATTCAGCTAGACTAATAGAATGTACAGTTATAGCAACGTCTTCATCAATACAAGAGTTCT 997 0.4594 MYGQAQAVNMPAQIGTSEDDDGSGAGAESIENHHIHYEHALEDVSGGVGGVVEDVTSDTVYASAGASDASQLTLSFRGQVYVFDSVTPDQVQAVLLRLGGCELSSGLQCVDRASQNQRGAMDYPGRCSQPQRAASLSRFRQKRKERCFDKKVRYSVRQEVALRMHRNKGQFTSSKKPEGDNSWGTAQESGQDENQSETSCTHCGTSSKSTPMMRRGPSGPRSLCNACGLFWANRGTLRDLSKRNQENSLPPVEQVDGEGNDSDCPTAFPAHNNLVTFSDNDNNQAITADQ 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00683 290 ProSiteProfiles Tify domain profile. 65 100 IPR010399 -
Bach12g00683 290 ProSiteProfiles CCT domain profile. 132 174 IPR010402 GO:0005515
Bach12g00683 290 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 196 245 - -
Bach12g00683 290 Pfam GATA zinc finger 200 236 IPR000679 GO:0006355|GO:0043565
Bach12g00683 290 SMART GATA_3 194 247 IPR000679 GO:0006355|GO:0043565
Bach12g00683 290 ProSiteProfiles GATA-type zinc finger domain profile. 194 245 IPR000679 GO:0006355|GO:0043565
Bach12g00683 290 MobiDBLite consensus disorder prediction 266 290 - -
Bach12g00683 290 Gene3D - 190 248 IPR013088 GO:0006355|GO:0008270
Bach12g00683 290 CDD ZnF_GATA 199 245 IPR000679 GO:0006355|GO:0043565
Bach12g00683 290 MobiDBLite consensus disorder prediction 174 213 - -
Bach12g00683 290 ProSitePatterns GATA-type zinc finger domain. 200 227 IPR000679 GO:0006355|GO:0043565
Bach12g00683 290 MobiDBLite consensus disorder prediction 165 219 - -
Bach12g00683 290 MobiDBLite consensus disorder prediction 241 290 - -
Bach12g00683 290 Pfam tify domain 69 98 IPR010399 -
Bach12g00683 290 MobiDBLite consensus disorder prediction 1 28 - -
Bach12g00683 290 PANTHER GATA TRANSCRIPTION FACTOR 28 14 261 IPR045280 GO:0006355
Bach12g00683 290 Pfam CCT motif 132 174 IPR010402 GO:0005515
Bach12g00683 290 SMART tify_2 65 100 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00683 Bach-Chr12 4755164 4759052 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00683 13 286 Tify Gene Family AT4G24470 48.355 8.78e-85 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bach12g00683 CCT 3.6e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00683 - - pvu:PHAVU_008G182900g 412.92