Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00682 ATGGCGGCGGTGAACCCACAGCCTCTTCTGGCGCGTCCGTTCGAGGAACATGGTCGAGGCCCGATAACGATCGAGGAAGATGATGGTGAGTATGATGATTGTGGTGGGAGTGGTGATGGTATGGATGAGGTGGAAGAGGCAAATATTAATTCTGTAAGTGTTATTGCTAACCATGGGGGAGTTGTTATGGCGTCTCGTACTAGTGAGCTTACACTTTCTTTCGAGGGCGAGGTTTACGTGTTTCCTGCTGTGACTCCTGAAAAGGTACAAGCGGTTTTGCTTCTTTTAGGTAGTCGTCATGTGCCGACGGGTGTGCCTACTGTTGAAGTACCATTTGATCAAAGTAACAGGGGCATCGGTGATACTCCAAAGCGTTCAGACCTTTCACGAAGAATAGCATCTTTGGTTAGATTTCGGGAAAAACGAAAGGAAAGATGTTTTGACAAGAAAATTAGGTACACTGTGCGAAAAGAGGTGGCACAGAGGATGCATCGAAAGAATGGGCAATTTGCATCTCTGAAAGATAGTCCAGGTTCATCTAATTGGGATTCTGCACAGAGTTTCCATCAAGATGGCACTCCTCATTCTGAAATTGTACGTAGGTGTCAACATTGTGGTGTCAGTGAAAATAATACTCCTGCTATGCGTCGTGGACCAGCTGGACCAAGAACACTATGTAATGCATGCGGTCTTATGTGGGCAAATAAGGGTACACTCAGAGATCTCAGTAAGGGAGGCAGAAATCTTTCTATTGAGCAAAATGAACTGGAGAATCCTATCGATGTCAAGCCTACTATTCTGGAAGGAGAATCGCCTGGTTTCCAGGATGAGCAAGGAACATCTCAGGATCCTGCTAAGGAAGTCACTGAAGGATATAATAACAATCCTATCAACCCAGACGATGTGGAATTGTCTGAATCTGCTGAACACTTTACCCACAGTATGCCTACGGGAATTCATTCTACAGAAAATGATGATGAGCAGGAACCTCTGGTTGAGCTTTCTAATCCTTCAGATACAGATATTGACATACCTGGAAATTTTGATTAGAAGGTATCAGGGCTTCATCTGTCGGGAGTTGTATATAATGGTTGGTCTTTAGTATATGCTTCCTGTACTAATGAGATGCAGGCCTTGAGGAAATGCCACGTTGAAAGATAAATAGAAAGTGTGTGTGGA 1179 0.4427 MAAVNPQPLLARPFEEHGRGPITIEEDDGEYDDCGGSGDGMDEVEEANINSVSVIANHGGVVMASRTSELTLSFEGEVYVFPAVTPEKVQAVLLLLGSRHVPTGVPTVEVPFDQSNRGIGDTPKRSDLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKDSPGSSNWDSAQSFHQDGTPHSEIVRRCQHCGVSENNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLSKGGRNLSIEQNELENPIDVKPTILEGESPGFQDEQGTSQDPAKEVTEGYNNNPINPDDVELSESAEHFTHSMPTGIHSTENDDEQEPLVELSNPSDTDIDIPGNFD 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00682 349 CDD ZnF_GATA 201 245 IPR000679 GO:0006355|GO:0043565
Bach12g00682 349 Pfam tify domain 66 97 IPR010399 -
Bach12g00682 349 Pfam GATA zinc finger 202 238 IPR000679 GO:0006355|GO:0043565
Bach12g00682 349 ProSitePatterns GATA-type zinc finger domain. 202 229 IPR000679 GO:0006355|GO:0043565
Bach12g00682 349 MobiDBLite consensus disorder prediction 252 349 - -
Bach12g00682 349 Pfam CCT motif 131 172 IPR010402 GO:0005515
Bach12g00682 349 ProSiteProfiles Tify domain profile. 63 98 IPR010399 -
Bach12g00682 349 MobiDBLite consensus disorder prediction 274 301 - -
Bach12g00682 349 MobiDBLite consensus disorder prediction 170 195 - -
Bach12g00682 349 SMART tify_2 63 98 IPR010399 -
Bach12g00682 349 MobiDBLite consensus disorder prediction 1 31 - -
Bach12g00682 349 PANTHER GATA TRANSCRIPTION FACTOR 28 4 342 IPR045280 GO:0006355
Bach12g00682 349 ProSiteProfiles GATA-type zinc finger domain profile. 200 254 IPR000679 GO:0006355|GO:0043565
Bach12g00682 349 MobiDBLite consensus disorder prediction 172 193 - -
Bach12g00682 349 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 195 248 - -
Bach12g00682 349 SMART GATA_3 196 263 IPR000679 GO:0006355|GO:0043565
Bach12g00682 349 ProSiteProfiles CCT domain profile. 131 173 IPR010402 GO:0005515
Bach12g00682 349 Gene3D - 196 249 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00682 Bach-Chr12 4749191 4753522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00682 28 258 Tify Gene Family AT1G51600 52.016 2.89e-69 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bach12g00682 CCT 1.3e-13 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00682 - - qsa:O6P43_019551 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00682 12 4749191 4753522 Bach12g00682 12 4749191 4753522 ECH