Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00623 ATGTCTACCATCTTGTCTGTCCATCTCTTTGATAAGCGTTTGTTAGTGTTCACTGTGGTTCTTTATTTGCTCTTGAATGTGAATGAAGCTCAATACAGAGCAGAGGCAGAGACCATGCCAGAGGTTGAGGATCCCCAGCCTATCAGTCCAGGCAAGGTAACTGTAATAGCGATCCTCTCGGTAATGTTTGGGATATCATTTCTCTTACTTGCCTATATCAAGTTCTGTCGAAGCAGCCCTCTTGAAATTCTGAACCGGAACACCCATCTCCAGAATATTCAAGGGCTTACTCGATCAGGGTCTAGATATTCTGGGATTGACAAGCAAGTAATTGAAGCACTTCCATTTTTCAGGTTTTCTTCACTCAAGGGATCAAAAGACGGACTAGAATGTGCTATTTGTCTCTCCAAATTCGAAGATGCTGAACTTCTCAGATTGTTGCCAAAGTGCAAGCACGCTTTCCACATGAACTGTATTGATAAGTGGCTGGAAGGTCACACTAGCTGCCCTCTTTGCAGGTACAGGGTGGACCCAGGGGACATCGACAACTTCACTTATTCAATCAGCTCAAGGTACCTAAGAGTTCCTTCAAATTTAACAGAGGACCCAAATCTTGAAATCTTTATTCAGAGGGAGCAGGATAGTCAAGGCAACATTGGAAGCAGCCTTTGGAATGTGGACAAGGGCCGGAGACAAGAACTGCTTATTGATCATGGAGGTGGGCTTAATCGGAAACCTTTGCACAGGTTCAATCACAAAATAGTAATCTCTGATTTTGTAACTAGGACCAGGTGGAGTGATCTTAATTCTTCAGACATTTTACTGTCCTTGAACACTGAAATGCTTAATGTTATGTCAAGCACAAGATTCTCTCCTTTGGAATCGCCTAAAATGGTGAAGTTCCATAGAAGTTCAAGCCATCCAACTAGTTCCAATGAAGAAGGCAATTCATTTGCTCTACTGAATCTTGGTGAGAAGAGATCCATGTCGGAGATTGCTAATGTTCAAAGGTTTGCGGAAATCAGCGGACACAACAGAATAAGAGAATCAATGGGATCTAGCAGAGAAGAGAGATTGAGGAGGATTTGGTTGCCAATTGTGCGGCGAACGGTGCAATGGTTTGCCAGACGAGAAAGAACCACAACAGAATTACAGCACGATCGATTGGCTGCAATTGTTTGA 1182 0.4315 MSTILSVHLFDKRLLVFTVVLYLLLNVNEAQYRAEAETMPEVEDPQPISPGKVTVIAILSVMFGISFLLLAYIKFCRSSPLEILNRNTHLQNIQGLTRSGSRYSGIDKQVIEALPFFRFSSLKGSKDGLECAICLSKFEDAELLRLLPKCKHAFHMNCIDKWLEGHTSCPLCRYRVDPGDIDNFTYSISSRYLRVPSNLTEDPNLEIFIQREQDSQGNIGSSLWNVDKGRRQELLIDHGGGLNRKPLHRFNHKIVISDFVTRTRWSDLNSSDILLSLNTEMLNVMSSTRFSPLESPKMVKFHRSSSHPTSSNEEGNSFALLNLGEKRSMSEIANVQRFAEISGHNRIRESMGSSREERLRRIWLPIVRRTVQWFARRERTTTELQHDRLAAIV 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00623 393 CDD RING-H2_EL5-like 130 173 - -
Bach12g00623 393 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 105 180 IPR013083 -
Bach12g00623 393 ProSiteProfiles Zinc finger RING-type profile. 131 173 IPR001841 -
Bach12g00623 393 FunFam RING-H2 finger protein ATL43 106 180 - -
Bach12g00623 393 SUPERFAMILY RING/U-box 110 178 - -
Bach12g00623 393 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 33 379 - -
Bach12g00623 393 SMART ring_2 131 172 IPR001841 -
Bach12g00623 393 Pfam Ring finger domain 130 173 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00623 Bach-Chr12 4235923 4237104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00623 50 380 C3H Transcription Factor Family AT2G20030 42.407 4.40e-81 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00623 K10664 - gmx:100803881 406.371