Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00609 ATGGAAGGTGATACGATAACCCCTGCTCCATCAGCTGGGCTAGGTGAAGGTGTCCAGAAAGTTAGAGCACTGCATGGGAGGACTAGTGGCCCTACAAGGCGTTCAACGAAAGGACAGTGGACACCTGAAGAGGATGAGATTTTGCAGAATGCTGTTCAGCGTTTTAAAGGGAAAAACTGGAAAAAAATAGCGGAGTGTTTCAAGGATAGAACCGATGTACAGTGTCTACATAGATGGCAGAAAGTCTTAAATCCAGAACTTGTGAAAGGTCCCTGGTCTAAAGAGGAAGATGAAATCATTATTGATTTGGTAAATAAATATGGGCCAAAAAAGTGGTCTACTATTGCACAGCATTTACCTGGACGTATTGGTAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCCTAATATAAACAAAGAAGCATGGACCCAAGAAGAGGAGTTGGCTCTGGTACGTGCTCATCAAATATATGGGAACAGATGGGCTGAACTGACGAAGTTCTTGCCTGGAAGGACAGACAATGCCATAAAAAATCACTGGAACAGTTCTGTCAAAAAAAAATTAGATTCTTACTTGGCATCAGGTTTGGTTTCTCAGTTCCAAACCCTACCTTCTGTTGGGCATCCAAATCAACCTGTGGTTTCAACCTCTTTGAGATTGCAGTACAGTGGAGATGGTAATGGTCATAAGGGAACTGAGGGAGGGGAAGTTTCGGAGTGTAGCCAAGATTCAGCTAATAATACTACTCGTTGCTTTCAATCTGCAAGAGATATGAGCAATGTTGTTTTACATGCTAGAGAGGAATTCAGGGTAAATGAAGATTCTAGTCTAGCAAAGGAGCATAGTATTAGTCAAGCATCCTGCTCAGAGCCTTATTATGTATCTCTTGATGATGTCGCTATATCCTTCCCAAACATATCTTGCCAAGAGGCTTGCTCTTCTCAATTCGTTGAGGCTGGAAATTCTGCAAGCGGAGAATGCCAGTTTAATATACATTCCCTACCTGATATTTCCTCGCTTGACTTGGGGCAAGAATCCTCACGGTTGCAAATGGATTGTATAGGCGCTAATGAAAGCCATGACATGGTGAATGTTCCTTTTCAAACTTCACTGGGGTTTAGTGTTTCAACATCCCTAGGACCTACATGCATGGATTCTATTAGACTAGAACACATGTTGATATCTGATGATGAGTGTTGTAGAGTCCTATTTCAAGACGCAGTTAATGAAGGATGCTTTTCCTCCGGAGATTATAATAAAGGTATGGATATGGTTGACTTATCTGGATGCACTTCTTTTCCTTGCCGATCTTCTGACATCCAGATACGTGAATCTGATGGAACGTCAGCTTCGCACCTAACTTGTCCTCCAAATTCTAATGGCCTAATAGGAACTTCGTGCTCCCAATCTTTTCCATGTGTTCCTTCAGTAATTTCTGTTGATGATGGTAGAACAGTTTATACTGCTGAAGCAAATAAAGTATTTGGAGCTGAGGATCATCAATTTGTCTCCAGAGGGCAAGGTAACTTCATTTATAATAATGACTCGTCCAGTTCTCCCTGTATTGATGCTATAGACAGTGCAGCAATGCTAGAACCACTAGCTACTGTGAAGGATAAATCAAAATCGGTCCCTCTAAATACTTTCGACTACGGATCAGATGCCCAGCCAAACTGTTTTCCAAAGGATGAAAAGCCTAATGTGCATACAGAACAGGAGGACAAAGGAGCTCTATGTTATGAGCCTCCCCGTTTTCCAAGCTTGGAAATGCCTTTCCTCAGCTGTGATCTTATACAATCTGTGGAAAATCTGCAGCAAGAGTTCAGTCCACTGGGTATCCGCCAGCTAATGATGTCTTCAATGAACTGTCTAAGTCCTTTCAGGCTATGGGACTCACCGTCTCGTGATGATAGTCCTGATGCTCTGTTAAAAAGTGCTGCAAAAACTTTCAGGGGTACGCCGTCAATATTAAAGAAGCGACACCGAGACTTGTTATCACCTCTGTCAGAGAGAAGAATGGACAAGAAGCTTGAGATTGACATGTTTGATGACAACGAGACTCGGGAAGTTCAACTTTCTGGAACCTCTGCTTATGATAACAAAGAAAACTGTGGACAAGGGGTACAAGTAGAAGGAAAAAATGAATATGCAGTTTTGAGAAATGTAAAGTCAGAGAAAGATAGTGGTGAAAATAACTCCAAGGATCAGCCACTTCTCAATGTTGACACTTCGGAGATTGTGAGTATTCATCCTTCTGAAGTCCTGCTTGAACGTGATATCAATGACTTGCTTTTATATTCTCCTGATCAAGATTTTAAATCAGAGAGAGCTTTGGGTTCAATTGCCAGAACTCCTAAAACTGAGAAAAATACAAGCTTGGAAGCAGATCAGAACATTCCTTCTAAATCATTATCTGGAAATCTACGCTCGACTGTTAGATCCCCTTGCGTTCGCTTAAAGGAGCATGAAAATCTTTCGATTACTGTTACTTGTGTACGGTCTGCTTGTTCGTCAACCCCGGGAGAGAAAACTGGCGATCATTCTGGGAACGACGCTGGTGTTGAAACATTTAACATATTTGGTGGAACACCATTTAGAAGAAGCATTGAATCACCATCAGCATGGAAGTCTCCTTGGTTTATTGGCACTCTTCTGCCGAGTCCAAGACCTGATACTGAAATAACTTTTGAGGCAATGCAATTTCTTTTACTCATGAGCCCAAGTGAAAGAAGCTATGATGCAATCGGGTTGATGAAACAGATCAGCGAGCAAACTGCTGCTGCATATGCGAATGCTCAGGAGGTTTTGGGAAATGAAACTCCGGAGGCGTTACTAAAAGATGCTTCTGAAAACGACAGGGATGTGGACCATACTCGAACTGGGAGCCATACCCAGTTGGCTTCAAATGCTTTGATGGAGCGACGCATCCTGGACTTCAGTGAATGTGGGACACCAGGGAAGGGTGAGAAAAGCAAATCCTCTGCTATGAGCTTCCCAAGCCCTTCTTCGTATTTGTTCAAGGGTTGTAGGTAG 3039 0.4242 MEGDTITPAPSAGLGEGVQKVRALHGRTSGPTRRSTKGQWTPEEDEILQNAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPNINKEAWTQEEELALVRAHQIYGNRWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYLASGLVSQFQTLPSVGHPNQPVVSTSLRLQYSGDGNGHKGTEGGEVSECSQDSANNTTRCFQSARDMSNVVLHAREEFRVNEDSSLAKEHSISQASCSEPYYVSLDDVAISFPNISCQEACSSQFVEAGNSASGECQFNIHSLPDISSLDLGQESSRLQMDCIGANESHDMVNVPFQTSLGFSVSTSLGPTCMDSIRLEHMLISDDECCRVLFQDAVNEGCFSSGDYNKGMDMVDLSGCTSFPCRSSDIQIRESDGTSASHLTCPPNSNGLIGTSCSQSFPCVPSVISVDDGRTVYTAEANKVFGAEDHQFVSRGQGNFIYNNDSSSSPCIDAIDSAAMLEPLATVKDKSKSVPLNTFDYGSDAQPNCFPKDEKPNVHTEQEDKGALCYEPPRFPSLEMPFLSCDLIQSVENLQQEFSPLGIRQLMMSSMNCLSPFRLWDSPSRDDSPDALLKSAAKTFRGTPSILKKRHRDLLSPLSERRMDKKLEIDMFDDNETREVQLSGTSAYDNKENCGQGVQVEGKNEYAVLRNVKSEKDSGENNSKDQPLLNVDTSEIVSIHPSEVLLERDINDLLLYSPDQDFKSERALGSIARTPKTEKNTSLEADQNIPSKSLSGNLRSTVRSPCVRLKEHENLSITVTCVRSACSSTPGEKTGDHSGNDAGVETFNIFGGTPFRRSIESPSAWKSPWFIGTLLPSPRPDTEITFEAMQFLLLMSPSERSYDAIGLMKQISEQTAAAYANAQEVLGNETPEALLKDASENDRDVDHTRTGSHTQLASNALMERRILDFSECGTPGKGEKSKSSAMSFPSPSSYLFKGCR 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00609 1012 CDD SANT 91 135 IPR001005 -
Bach12g00609 1012 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
Bach12g00609 1012 MobiDBLite consensus disorder prediction 983 1012 - -
Bach12g00609 1012 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
Bach12g00609 1012 CDD SANT 40 83 IPR001005 -
Bach12g00609 1012 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
Bach12g00609 1012 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
Bach12g00609 1012 Gene3D - 36 88 - -
Bach12g00609 1012 FunFam Transcription factor MYB3R-2 142 204 - -
Bach12g00609 1012 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Bach12g00609 1012 FunFam Transcriptional activator Myb isoform A 36 88 - -
Bach12g00609 1012 SMART sant 36 85 IPR001005 -
Bach12g00609 1012 SMART sant 88 137 IPR001005 -
Bach12g00609 1012 SMART sant 140 188 IPR001005 -
Bach12g00609 1012 MobiDBLite consensus disorder prediction 787 808 - -
Bach12g00609 1012 Gene3D - 142 201 - -
Bach12g00609 1012 MobiDBLite consensus disorder prediction 224 243 - -
Bach12g00609 1012 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Bach12g00609 1012 Pfam Myb-like DNA-binding domain 89 135 IPR001005 -
Bach12g00609 1012 Pfam Myb-like DNA-binding domain 141 183 IPR001005 -
Bach12g00609 1012 CDD SANT 143 183 IPR001005 -
Bach12g00609 1012 SUPERFAMILY Homeodomain-like 38 93 IPR009057 -
Bach12g00609 1012 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
Bach12g00609 1012 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Bach12g00609 1012 PANTHER MYB PROTEIN-RELATED 37 122 - -
Bach12g00609 1012 Gene3D - 89 140 - -
Bach12g00609 1012 FunFam Transcriptional activator Myb isoform A 89 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00609 Bach-Chr12 4140750 4146339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00609 9 680 MYB Transcription Factor Family AT4G32730 49.927 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach12g00609 Myb_DNA-binding 8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00609 - K09420 gmx:100811335 1270.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00609 12 4140750 4146339 Bach12g00609 12 4140750 4146339 ECH