Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00594 ATGCAAAAGGAGAAGGAAGGAAGCAAAGAGGTGGGGGCAGATATGGATGGTGAGATCCCTTCAAAGGATAAAAACCTACCTCCTGGGTATCGATTTCATCCCACCGATGAAGAACTCATTACTTATTATCTCATGAATAAGATATCAGATTCTAATTTTACAGGAAGAGCTATAACTGATGTAGATATCAATAAATGTGAGCCATGGGAACTCCCAGGGAAGGCAAAGATGGGAGAAAAAGAATGGTACTTCTTCAGTCTTAGAGATCGGAAGTACCCAACGGGGGTGAGAACAAATCGAGCTACAAACACTGGGTACTGGAAGACCACAGGAAAAGACAGAGAGATCCTTAACAATGCTACATCGGAGTTGGTTGGTATGAAGAAGACTTTGGTTTTCTATAAAGGTAGAGCCCCAAGAGGAGAGAAAAGCAACTGGGTCATGCATGAATATCGCATTCACGCCAAATCCAGCCTCCGAACCAACAAGCAGGATGAATGGGCGGTTTGCCGTGTGTTCCAGAAGAGTGCTGGTGTAAAAAAGTACCCTTCCAACCATACAAGGGCAGTGAATCCTTACAACCTAGAGATAGGTCCTAGCATGGTTCCACCGCCACTGATGCAGCTGGGAGATCCTGGAGGTCATTTCCTCTATGGAAGGAACAATATGAGTGGTGCAGATTTAGCAGAGGTCGCTAGGGTTTTGAGAGTTGGAGGATCGACTAGTGTCAACCTACCAATGCAATCCCAATTGAACTACCCAGTAACAGGAGGTGGATGTTTCACAATATCTGGGCTAAATTTGAATCTGGGAGGAGCAGCAGCTACAACGCAACCAGTTTTGAGGCCAATGCCGGCACCGCCACCTCAGGCTCATCAGACACTTCCTGCTCATGCAATGACTCAACATGATGCCAGTTCTAACATGATGACAGCTTCTCTTGCTTCTGAGAATTTAGGGTATGGTACAGAAATGAGCAATGCAAATCCTCACAGCAATAGGTATGTGGGCATGGACCATTCTATGGATCTAGATAACTACTGGGCTTCCTACTGA 1056 0.4555 MQKEKEGSKEVGADMDGEIPSKDKNLPPGYRFHPTDEELITYYLMNKISDSNFTGRAITDVDINKCEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDREILNNATSELVGMKKTLVFYKGRAPRGEKSNWVMHEYRIHAKSSLRTNKQDEWAVCRVFQKSAGVKKYPSNHTRAVNPYNLEIGPSMVPPPLMQLGDPGGHFLYGRNNMSGADLAEVARVLRVGGSTSVNLPMQSQLNYPVTGGGCFTISGLNLNLGGAAATTQPVLRPMPAPPPQAHQTLPAHAMTQHDASSNMMTASLASENLGYGTEMSNANPHSNRYVGMDHSMDLDNYWASY 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00594 351 MobiDBLite consensus disorder prediction 1 21 - -
Bach12g00594 351 Pfam No apical meristem (NAM) protein 27 153 IPR003441 GO:0003677|GO:0006355
Bach12g00594 351 Gene3D NAC domain 35 179 IPR036093 GO:0003677|GO:0006355
Bach12g00594 351 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 23 292 - -
Bach12g00594 351 ProSiteProfiles NAC domain profile. 26 175 IPR003441 GO:0003677|GO:0006355
Bach12g00594 351 SUPERFAMILY NAC domain 24 175 IPR036093 GO:0003677|GO:0006355
Bach12g00594 351 MobiDBLite consensus disorder prediction 1 30 - -
Bach12g00594 351 FunFam NAC domain-containing protein 100-like 35 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00594 Bach-Chr12 4040297 4042241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00594 22 351 NAC Transcription Factor Family AT2G24430 51.275 4.09e-109 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bach12g00594 NAM 1.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00594 - - qsa:O6P43_015549 526.939