Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00588 ATGTCCACGGATCTAAAGAAATCTAACAAAATCAGAGAAATTGTTAGGCTTCAACAGATCCTTAAGAAATGGAGAAGGGTAGCCAATTCTTCCAACACCAGCAGTAGCAGTAAAAGCATCAAGTTTCTGAGAAGGACACTTTCCTTATCTGATCGTGAAGGAGGATCAAGTAATGTTGTCCCCAAAGGCTACCTCGCTGTTTGTGTTGGAGAAGAGCGCAAGCGGTTCATTATACCAACTGATTATTTGGGTCATCAAGCCTTCCACATATTGCTGAAAGAAGCAGAAGAAGAATTTGGGTTTCAGCAGACTGGTGTTCTGAGGATTCCCTGTGAAGTTTCTGTGTTTGAGAGTATCTTGAAGATAGTGGAAAGAAAGGAGGACAAGTCTTCCATTCAGGAATGTAGACTTAGTTTTGAAGAGATTACCGGCTGTTGCTCATCGGAAAACCAGCTTGCTTATTCTCACCATCCTCACAGTCCAATGTGCAGATAG 495 0.4222 MSTDLKKSNKIREIVRLQQILKKWRRVANSSNTSSSSKSIKFLRRTLSLSDREGGSSNVVPKGYLAVCVGEERKRFIIPTDYLGHQAFHILLKEAEEEFGFQQTGVLRIPCEVSVFESILKIVERKEDKSSIQECRLSFEEITGCCSSENQLAYSHHPHSPMCR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00588 164 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 36 119 IPR003676 GO:0009733
Bach12g00588 164 Pfam Auxin responsive protein 22 122 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00588 Bach-Chr12 4007361 4007855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00588 4 164 Calmodulin-binding Proteins AT2G24400 53.476 7.05e-59 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00588 K14488 - gmx:100799598 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00588 12 4007361 4007855 Bach3g01851 3 26744719 26745219 BWGD
Bach12g00588 12 4007361 4007855 Bach12g00588 12 4007361 4007855 ECH