Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00564 CTCTATTCCAAAGGAAGGAGAGGGGAAGAAAAAGAAGAGCAAAAGATTTGAAGGGAACAAACAATAGATGGATGAATATTCTGGTAAAAGAGCCAACAATGAGGTAGTAGTCCCTAGAAAGGGAATGACTCACGTGTTTAGAGATACTGCTAATACTAGGAATCGAAATGGTCAATTGTGCAGCCGACTTGGTTGCAGTAGCAGGGTCAACACTCCTAAAGGTGCTCAAATTGCTTATTCTGAGAAAGGCAAATCTTTGAGGTCTTCAATCAGACCCTCTTCAAATGGCAAAGAAGCAATTGGAAGTTCCTCTAGAACTGTCTCAGGAACAAATAACCCAGGAAAATCCCTCACTGAGCCTAGGAAAACATTATCCTCTCAGTCAGAAACAGGTTCATCCGAAACGAGCAGTGTACAGGATGAACCACTAGTTTTGGAGTTCATCCCTCCACCAGAAAAAATCCAGAGAGGGCTTCAAGCTGAACTTGAAAATACAGATTCCGGTAATACATTGCTGGAAGCAGGAAGCTCGAGTGTAGTATCAAATACAAGATCTCGGAGGAACTTTCGTCAAAAGCCTGGATTGCATGGTCAAGAAGTTAAAAACACTGGCCCAGTAACACGTGGTGGTAGCAGCGGCTATGGGTTGAGGAACCTCCGATGCAACTCTATATCCGATGTCATCCCAGCTGGGTCTTCATCATCAGATTCAAGCCTCAATAGAAGAAAGGATATGATGAAGAAGAGAAACTTTGGAGGAGAAAGTAGTTCTACTGGTAGAGGGAAGAAGATGGGTGGGTCTCCATTGGAAGGACGGAATTCTGGTTCTAGAAATGGCATATCCATATCTGATTCAAGAAGATCCGGAAATATTCCTGCTCACAGGGACAACAACATTGTATCAGTTAGAACTCGAAGCTCAGTTAGTGGTCATGCCAGGGGAAGGCTTTCTAGCCTAGGAAATGAAAGCCCCGTGTCATCGAATGAGTCCCCTATCATGATACCACCTTTGCCTCATTCTGGTGACCTTACCACTCCTGGTTTATCCCTTCATACTTCTTCAGAGACTCCTTTAAGTCGTCCAAGCTCTTATAGTAGACCGAGTACTAGCATTGAGCAGTTATGTGGAGTTATCCCTCCCTCAACTACGGAATATGGCATCACTCGTTCATTAATAAACCGGGACAGCTTTCGGCGCTACAACATGGATGGTATTGCAGAGGTACTAATGGCACTTGAGAGGATTGAACAAGATGAAGATCTGACACATGAGCAAATTCTTTTACTGGAGACCAACCTGTTCCTTAATGGACTAAACTTCTATGATCAGCACAGAGACATGCGGCTGGATATTGATAACATGTCATACGAGGAGCTATTAGCTCTAGAAGAGAGTATGGGTAGCGTGAGCACTGCCTTAACTGAGGAAGAGTTGTCAGAATGCTTAAAGAGAAGCATTTACCTGTGTGCACTTTCAGACGATGCAACTGAGAGTTGCAATGAGGATAAGGATGATACCAAATGCAGTATCTGCCAGGAGGAATATGTGGTTGGAGATGAAGTGGGGAATTTGCAGTGCGAGCATAGGTATCATGGGGTTTGCATACAGCAGTGGCTGCGATTGAAGAACTGGTGTCCAATATGCAAAGCATCAGCAGCACCAACAAATTCATCTTCACCCTATTGA 1687 0.4404 MDEYSGKRANNEVVVPRKGMTHVFRDTANTRNRNGQLCSRLGCSSRVNTPKGAQIAYSEKGKSLRSSIRPSSNGKEAIGSSSRTVSGTNNPGKSLTEPRKTLSSQSETGSSETSSVQDEPLVLEFIPPPEKIQRGLQAELENTDSGNTLLEAGSSSVVSNTRSRRNFRQKPGLHGQEVKNTGPVTRGGSSGYGLRNLRCNSISDVIPAGSSSSDSSLNRRKDMMKKRNFGGESSSTGRGKKMGGSPLEGRNSGSRNGISISDSRRSGNIPAHRDNNIVSVRTRSSVSGHARGRLSSLGNESPVSSNESPIMIPPLPHSGDLTTPGLSLHTSSETPLSRPSSYSRPSTSIEQLCGVIPPSTTEYGITRSLINRDSFRRYNMDGIAEVLMALERIEQDEDLTHEQILLLETNLFLNGLNFYDQHRDMRLDIDNMSYEELLALEESMGSVSTALTEEELSECLKRSIYLCALSDDATESCNEDKDDTKCSICQEEYVVGDEVGNLQCEHRYHGVCIQQWLRLKNWCPICKASAAPTNSSSPY 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00564 539 FunFam E3 ubiquitin-protein ligase arkadia 448 532 - -
Bach12g00564 539 MobiDBLite consensus disorder prediction 224 345 - -
Bach12g00564 539 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 470 537 IPR013083 -
Bach12g00564 539 MobiDBLite consensus disorder prediction 56 122 - -
Bach12g00564 539 MobiDBLite consensus disorder prediction 146 166 - -
Bach12g00564 539 Pfam Ring finger domain 485 527 IPR001841 -
Bach12g00564 539 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 74 531 IPR045191 GO:0061630
Bach12g00564 539 ProSiteProfiles Zinc finger RING-type profile. 486 527 IPR001841 -
Bach12g00564 539 MobiDBLite consensus disorder prediction 146 193 - -
Bach12g00564 539 MobiDBLite consensus disorder prediction 249 308 - -
Bach12g00564 539 MobiDBLite consensus disorder prediction 60 118 - -
Bach12g00564 539 MobiDBLite consensus disorder prediction 323 345 - -
Bach12g00564 539 SMART ring_2 486 526 IPR001841 -
Bach12g00564 539 SUPERFAMILY RING/U-box 480 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00564 Bach-Chr12 3855178 3859080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00564 365 533 C3H Transcription Factor Family AT2G15530 40.828 1.04e-34 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00564 - - gmx:100787213 710.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01875 3 26894881 26897357 Bach12g00564 12 3855178 3859080 BWGD