Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00560 GCTCCCTCGCTTTTCATATAATCCTTTTAATCGTTTCCATTTCTTAAGAAGTTAATATTTGATCGGAGAAAAATCACAAAGGGTTTAATCATGCTGGGACTATCGTGTAACGCTTGCAACAAAGAATTTAAGGACGATGCAGAGCAAAAGCTCCATTATAAGTCCGAGTGGCACCGCTACAATCTTAAGCGCAAGGTGGCCGGAGTTCCTGGGGTGACAGAAGCACTATTTCTGGCTAGACAATCTGTTCTTGCTCAAGAGAAGGATAAATCGAGTGAAACCCCCATGCTCTATAGTTGTGGCCTCTGTGGAAAAGGGTATAAAAGCTCTAAGGGTCATGCTGAGCATCTTAAATCCCGTGGTCATTTGATGCGGGCCTCTCAAGGAACTAGTCCTTCAGATGAGAAGGCAATAATCAAGCCTCTTCCACAACGTGTTTCAAATAAACCTCCTCCAAGAAGAGATGTGGAAAATTCTGAAAGAGAAGAAAGTGAAGATGAATGGGAGGAAGTTGATCCTGAAGAGAATTCGGTTAATGACGATACAAAGTCCTTGACTGCTTTGAATGTGGATGAGCATACTTCCAATGTTGATATGGATGAAGATGATGATGGTGATGATTATGAGTTGGACCCATCCTGTTGCTTTATGTGTGATCAAGATCATGATACCATAGAAAGCTGCATGTTTCACATGCACAAGCAGCATGGATTCTTCATTCCTGATGTGGAGTATTTGAAGGATCCAGAAGGTCTCCTTACTTATCTTGGTCTTAAGGTCAAGAGGGACTATATGTGTCTGTATTGCAATGATAGATGTCAGCCTTTCAGCAGCTTGGAAGCAGTTAGGAAGCACATAGCGGCGAAAAGTCACTGTAAAGTGCATTATGGTGATGGTGATGAGGAGGAGGAGGCAGAGTTGGAAGAATTCTACGACTATAGCAGCAGTTACATCGATGAACAAGGCAAGCAGCTGGTTGCATCAGGTGATATGGCCAACAATGTAGAACTTGGTAGTGGTGGATCTGAGCTCATCATCACTAAGAAATCTGATGAAGGGATACATACCAAAACCCTTGGTTCCCGTGAATATTTGCGTTATTATCGTCAGAAACCTCCGCCATCACCTTTAAATAACATGGCCATTACTGCTGCATTAGCTGCAAGGTACAGGAGCATGGGTTTGGCCACCGTCCAGTCAAGGGAGAACATGGTGAGGTTGAAAGTACTGAAGGAAATGAATAGGTCTGGTGTGGAGACTATGCGTACTAAAATAGGGATGAAGAGTAATGTTATCCGAAACCTGCCAAAGAATGTCCCATATTAGTCTTCTGTCTCCCTTCCCCTGTAGTAAAGCGAGGATGAATTCAAGTGTTGTTTTGTAATTTTGTGGAGTTCTGAGCTTTCTTTTTCTTGATTGATTTTTCCGTTGTGATCACCTTAAAGCATCACTCATATATATGGAGTTCCGG 1471 0.4262 MLGLSCNACNKEFKDDAEQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQSVLAQEKDKSSETPMLYSCGLCGKGYKSSKGHAEHLKSRGHLMRASQGTSPSDEKAIIKPLPQRVSNKPPPRRDVENSEREESEDEWEEVDPEENSVNDDTKSLTALNVDEHTSNVDMDEDDDGDDYELDPSCCFMCDQDHDTIESCMFHMHKQHGFFIPDVEYLKDPEGLLTYLGLKVKRDYMCLYCNDRCQPFSSLEAVRKHIAAKSHCKVHYGDGDEEEEAELEEFYDYSSSYIDEQGKQLVASGDMANNVELGSGGSELIITKKSDEGIHTKTLGSREYLRYYRQKPPPSPLNNMAITAALAARYRSMGLATVQSRENMVRLKVLKEMNRSGVETMRTKIGMKSNVIRNLPKNVPY 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00560 411 SUPERFAMILY beta-beta-alpha zinc fingers 4 36 IPR036236 -
Bach12g00560 411 ProSitePatterns Zinc finger C2H2 type domain signature. 70 92 IPR013087 -
Bach12g00560 411 SMART c2h2final6 234 261 IPR013087 -
Bach12g00560 411 SMART c2h2final6 68 92 IPR013087 -
Bach12g00560 411 SMART c2h2final6 4 28 IPR013087 -
Bach12g00560 411 MobiDBLite consensus disorder prediction 81 174 - -
Bach12g00560 411 Pfam C2H2 type zinc-finger (2 copies) 185 286 IPR041661 -
Bach12g00560 411 SUPERFAMILY beta-beta-alpha zinc fingers 170 288 IPR036236 -
Bach12g00560 411 ProSitePatterns Zinc finger C2H2 type domain signature. 6 28 IPR013087 -
Bach12g00560 411 PANTHER ZINC FINGER PROTEIN 622 3 410 IPR040025 -
Bach12g00560 411 MobiDBLite consensus disorder prediction 131 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00560 Bach-Chr12 3816211 3818673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00560 1 411 C2H2 Transcription Factor Family AT4G31420 66.265 0.0 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach12g00560 zf-C2H2_2 3.2e-25 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00560 K14816 - zju:107420801 644.425