Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00543 ATGTCAGACGCTTGTCGTTTACGGGGAAAACAAATGATGGGACCTTCATTTCTTGCCGACTTAACCGACATTTCAGAGTTAGGCTCAGCCACATTGTCGTCTAGAAAAGTTCTTGGAGGAGTCAGTGCAGTTGCAGAACTGCCAATTGAGGTTGGAGCGTCAATTGGTTGGCTCCAGTATAGTTGGATTTGGTTCTTGAAGTTCTTCAGGGAATCAAGTGATCATTCCATGCATCATGGGAGAGGTGGCGAACCCAATGCAGACTGCATGCCAGGAGAAGAACCCAGAGATCATGAAAACATCAGTGACTTACGAGAGAAAGGATATATGCAATATGGATGTTCTCATTACCGAAGGAGATGCCGAATCAGGGCCCCATGTTGCAATGAGATTTTTGATTGCCGTCATTGTCACAATGAGGTGAAAAATAACATTAGCATTGACCAAAAGCATAGGCATGACATTCCCCGTCTTCAAGTTAAACAGGTGATATGTTCACTTTGTGGGACAGAACAAGAGGTCCAGCAAAATTGTATTAACTGTGGTGTTTGCATGGGCAAATATTTTTGCAAGACGTGCAAGCTCTATGATGATGATATATCTAAGCAGCAGTACCATTGCAATGGGTGTGGGATTTGTAGAATTGGGGGACGACAGAATTTCTTCCATTGCCATAAGTGTGGTTGTTGCTACTCGATTTTGCTGAAAAACAGTCACCCTTGTGTGGAAGGAGCTATGCATCATGATTGCCCTGTTTGTTTTGAGTATTTGTTCGAATCCAGGAATGACGTCACTGTTATGCCCTGTGGGCATACAATCCATAAGAGCTGCCTGAAGGAAATGAGAGAACATTGTCAGTATGCATGCCCCCTCTGCTCAAAATCAGTTTGTGATATGTCAAAGGTGTGGGAGAAATTTGACATGGAGATTGCCGCCACACCAATGCCTGAACCATATCAAAATAAAATGGTCTGGATCCTTTGCAATGATTGTGGTAAAACTTCTTACGTTCAGTTCCATGTTCTTGCTCAAAAGTGTTCGAACTGCAAATCCTACAATACACGACAAACAAGAGGCTGA 1080 0.4315 MSDACRLRGKQMMGPSFLADLTDISELGSATLSSRKVLGGVSAVAELPIEVGASIGWLQYSWIWFLKFFRESSDHSMHHGRGGEPNADCMPGEEPRDHENISDLREKGYMQYGCSHYRRRCRIRAPCCNEIFDCRHCHNEVKNNISIDQKHRHDIPRLQVKQVICSLCGTEQEVQQNCINCGVCMGKYFCKTCKLYDDDISKQQYHCNGCGICRIGGRQNFFHCHKCGCCYSILLKNSHPCVEGAMHHDCPVCFEYLFESRNDVTVMPCGHTIHKSCLKEMREHCQYACPLCSKSVCDMSKVWEKFDMEIAATPMPEPYQNKMVWILCNDCGKTSYVQFHVLAQKCSNCKSYNTRQTRG 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00543 359 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 245 313 IPR013083 -
Bach12g00543 359 ProSiteProfiles Zinc finger CTCHY-type profile. 185 249 IPR017921 -
Bach12g00543 359 Pfam CHY zinc finger 114 195 IPR008913 GO:0008270
Bach12g00543 359 SUPERFAMILY CHY zinc finger-like 111 185 IPR037274 GO:0008270
Bach12g00543 359 CDD RING-H2_Pirh2-like 249 293 - -
Bach12g00543 359 SUPERFAMILY Zinc hairpin stack 186 243 IPR037275 -
Bach12g00543 359 SUPERFAMILY RING/U-box 249 297 - -
Bach12g00543 359 ProSiteProfiles Zinc finger RING-type profile. 250 293 IPR001841 -
Bach12g00543 359 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 102 358 - -
Bach12g00543 359 ProSiteProfiles Zinc finger CHY-type profile. 107 183 IPR008913 GO:0008270
Bach12g00543 359 Pfam Zinc-ribbon 297 355 IPR039512 -
Bach12g00543 359 Gene3D - 321 359 - -
Bach12g00543 359 SMART ring_2 250 292 IPR001841 -
Bach12g00543 359 Pfam Ring finger domain 249 292 IPR001841 -
Bach12g00543 359 MobiDBLite consensus disorder prediction 77 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00543 Bach-Chr12 3697372 3703138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00543 104 359 C2H2 Transcription Factor Family AT3G18290 38.314 6.75e-54 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00543 K10144 - gmx:100803569 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01900 3 27102048 27106777 Bach12g00543 12 3697372 3703138 BWGD
Bach12g00543 12 3697372 3703138 Bach12g00543 12 3697372 3703138 ECH