Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00540 TTCAATTCAGCCCTAGAGCTACATCCCAAGGTATTCCAATTCAAAGTTGTTGTTGCATCAATGGCAGTTTCAGATTAGATCCAGGGTTTTCATCTCGTCGTTATCCATCAGCCCCTGCTGGGGTGAACTCGATTTTCCGGTGCTGGGATTGGGGATCTCTCATTTTGGAGGCAATTGATCCCTGTGCCGGTTACTGTGAATCTCTGGATTTGAAAGGTGGGCAAGGAAAATGCATGTTAAATCGGCGCAATCATCGTTTCGCGATCGGACACTGGAATTTCAAAGCATAGCCGAGAGGCTAAAGAAATCAATCTCATCGGGATCAGGGCCAAATGGACCAAGTAGTAGTTCGAAATCGGAGGAACAGCGATCTGCTGTTGCACTTCAGTCAGAGTTTAATAGGAGGGCTTCCAAGATTGGATATGGGATACATCAGACGTCGCAGAAGCTTGCTAAGCTGGCCAAGTTGGCAAAAAGGACTTCGGTTTTTGATGACCCCACCATGGAAATCCAAGAGCTTACAGCAGTTGTTAAGCAAGATATTACTGCACTAAATTCTGCTGTTGTGGATCTTCAGCTACTCTGCAACTCTAGACACGATAGTGGGAATATCTCTAGTGACACAACTAGTCATTCTACCACAGTCGTGGATGACCTAAAAAACCGATTAATGAGCGCCACTAAAGAGTTTAAAGAAGTCCTGACCATGCGAACAGAGAACTTGAAAGTCCATGAGAACAGAAGACAGTTGTTTTCCTCTACTTCTTCCAAGGACTCTGCAAATCCTTTTGTTCGTCAACGTCCATTGGCTTCAAGGGCAGCTGCCAGTTCTTCTAATGCCCCTGCTCCTCCATGGGCTAGTGGGTCATCATCTTCTTCTCAGTTATTTCCCAAGAAACACGTAGATGGGGAGAGTCAACCATTGCTGCAACAGAACGTTCAACAGCAGCAGCAGTTGGTTCCATTGCAAGACAGTTATATGCAAAGCAGAGCTGAAGCTCTTCAGAATGTTGAGTCTACTATTCATGAACTGAGCAACATCTTTAACCAATTGGCAACACTTGTTTCTCAACAAGGAGAGATTGCAATCAGGATTGATGAGAACATGGATGATACATTGGCTAATGTAGAAGGGGCTCAGGGGGCGTTGTTGAAGTACCTGAACAGCATATCTTCTAATAGGTGGCTGATGATCAAGATTTTCTTTGTATTAATTTTTTTCCTAATGGTTTTCCTATTTTTTGTGGCATAGTTATCCCAGAGACAGAGAATTGAAGAGTAAGACACAAGTAACGGCCTTCTGACTGGTGATTAGCCATTTGTATTTCATTAATATTTCTTACTTTAAAT 1350 0.4333 MHVKSAQSSFRDRTLEFQSIAERLKKSISSGSGPNGPSSSSKSEEQRSAVALQSEFNRRASKIGYGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTAVVKQDITALNSAVVDLQLLCNSRHDSGNISSDTTSHSTTVVDDLKNRLMSATKEFKEVLTMRTENLKVHENRRQLFSSTSSKDSANPFVRQRPLASRAAASSSNAPAPPWASGSSSSSQLFPKKHVDGESQPLLQQNVQQQQQLVPLQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEIAIRIDENMDDTLANVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00540 340 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 7 26 IPR021538 -
Bach12g00540 340 MobiDBLite consensus disorder prediction 25 51 - -
Bach12g00540 340 SMART tSNARE_6 243 310 IPR000727 -
Bach12g00540 340 Gene3D - 50 303 - -
Bach12g00540 340 MobiDBLite consensus disorder prediction 171 186 - -
Bach12g00540 340 ProSitePatterns Syntaxin / epimorphin family signature. 254 293 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bach12g00540 340 MobiDBLite consensus disorder prediction 195 223 - -
Bach12g00540 340 SUPERFAMILY t-snare proteins 53 303 IPR010989 GO:0016020|GO:0016192
Bach12g00540 340 MobiDBLite consensus disorder prediction 169 223 - -
Bach12g00540 340 Pfam SNARE domain 284 336 IPR000727 -
Bach12g00540 340 CDD SNARE_syntaxin5 251 329 - -
Bach12g00540 340 PANTHER SYNTAXIN 52 332 IPR045242 -
Bach12g00540 340 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 248 310 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00540 Bach-Chr12 3674469 3677894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00540 1 340 SNARE and Associated Proteins AT3G24350 65.014 3.10e-146 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00540 K08490 - zju:107414151 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00540 12 3674469 3677894 Bach12g00540 12 3674469 3677894 ECH