Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00536 ATGGATGTTCTCTCACCAGAACTATATCCTGAAGGTCGAGTTGACACTGATCCATTGTTGATGGAGCAGCCAGGGCACTTGATCTACAGTCAGCAGACTCATCACATCATTGACATAACCGGGAGTACTGATGCCTCCACCTCTACCTCTCCTCATGATAGACATTTTAATGGCATGGATGCATCACAGCACGAAGGTGGACCGAGTAGTTCAAGATTACCTGTTTCTCAACCTTCAGTTCCCCCTGCTAGTATATATAATGGATCAAATTCTAGGAATTCTTCGTCAGTTAGAAGAGGGAATACCCGGCGACATAGGAGTCCATTGAATTCGGGGTTATGGATATCTGTTGAATTAGTCCTCACAGTGAGCCAAATTGTTGCATCTATTGTTGTTTTGTCTTTGTCAAGGCATGAGCATCCACAGACTCCATTGTTTGCATGGATTCTGGGTTATGCAATTGGATGTGTTGCTATCCTCCCTCTTCTTTATTGGCGTTATTATCATCACCGCCAGATTCGTGACCAAGATTCATCTCAACGGCGTCAAACTTCTCCTCAAATTAATGGCCCTCCAGGGCCCTTTTCTCTTTCCATTTCTAGAACTAGTGAAGGAGAAGATAATCAGGCTGCTGCAGCATCCAGCAGCAATCAAGGTTCATGGTTGATGAATCCACGATTGAAGACTCTAATGGAATACTTCAAAATGGCTTTGGATTGCTTTTTTGCGGTATGGTTTGTTGTGGGCAACGTGTGGATCTTTGGAGGACATGCATCTGCTGATGAGGCTCCTAACTTGTACAGGTTATGTATAGTGTTTCTTACCTTTAGCTGTGTTGGTTATGCTATGCCCTTCATTCTATGTGCAACAATATGCTGTTGTCTGCCTTGTATAATCTCCATACTAGGGTTTAGAGAGGATCTGACAAACACCAGAGGGGCAACCCCTGAGTCCATTAATGCTCTTCCAACTTACAAGTTCAAAATGAAGAAACATAAAAAGAGTGATGAAAGCAACTCGGCTGTTGGTGAAGGTGGAGTTGTGGCTGCAGGAACTGAAAAGGAGCGTTTGATTTCTGGTGAAGATGCAGTTTGCTGCATCTGCCTGGCAAAGTATGAAAACAATGAGGAGCTGAGGGAGTTGCCCTGTGCTCATATGTTCCACAAAGACTGTGTAGACAAGTGGTTGAAGATAAATGCATTATGCCCTCTTTGCAAGAATGACGTTGGTGAGAACGTAACAGGATCGATCTCTAGGGATAATGGCAGCCAACAACGGGGATAG 1284 0.4408 MDVLSPELYPEGRVDTDPLLMEQPGHLIYSQQTHHIIDITGSTDASTSTSPHDRHFNGMDASQHEGGPSSSRLPVSQPSVPPASIYNGSNSRNSSSVRRGNTRRHRSPLNSGLWISVELVLTVSQIVASIVVLSLSRHEHPQTPLFAWILGYAIGCVAILPLLYWRYYHHRQIRDQDSSQRRQTSPQINGPPGPFSLSISRTSEGEDNQAAAASSSNQGSWLMNPRLKTLMEYFKMALDCFFAVWFVVGNVWIFGGHASADEAPNLYRLCIVFLTFSCVGYAMPFILCATICCCLPCIISILGFREDLTNTRGATPESINALPTYKFKMKKHKKSDESNSAVGEGGVVAAGTEKERLISGEDAVCCICLAKYENNEELRELPCAHMFHKDCVDKWLKINALCPLCKNDVGENVTGSISRDNGSQQRG 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00536 427 MobiDBLite consensus disorder prediction 41 56 - -
Bach12g00536 427 SUPERFAMILY RING/U-box 356 411 - -
Bach12g00536 427 ProSiteProfiles Zinc finger RING-type profile. 365 406 IPR001841 -
Bach12g00536 427 Pfam Ring finger domain 365 406 IPR001841 -
Bach12g00536 427 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 347 414 IPR013083 -
Bach12g00536 427 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 30 409 - -
Bach12g00536 427 MobiDBLite consensus disorder prediction 63 97 - -
Bach12g00536 427 MobiDBLite consensus disorder prediction 41 107 - -
Bach12g00536 427 FunFam E3 ubiquitin-protein ligase 348 414 - -
Bach12g00536 427 SMART ring_2 365 405 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00536 Bach-Chr12 3636122 3638515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00536 14 416 C3H Transcription Factor Family AT1G80400 53.922 2.88e-150 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00536 - - qsa:O6P43_015633 588.186