Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00534 ATGGATAAGGAAAACAAAATTTGTGCCAAACATGAAGAGCGTCCAGTCCGAATCACTCGAGCAAGGGCTAGGGCCTTGGGATCCATTGGAGGGATACCTCCCTCCTCAAGACCATCATTTAAACCAGAACAGAAGCGTGTCCTTCGAGCAAATTACAAAAGAGGAGCATCTGACGAGAATAAAACTTCTGCGGCTGCCCCTGCTGTTCTTCAGCATAAGAGGAAGGCAGTGCTTACCGATGTAACTAACATCAATGAGATATCATATAATAATAATATTATTAATGCGTCAAAATTTCAGGCAAGAAGAGGTCATACGAGGAAAAACATGAAGCTAGCTGCAGAAGTCTCCAGAGAAGTTCCGTCAATACAAGAGGATGTTAAGACAAAGTTAGCTGAAGAATTATCCAAAATACGGATGGTAGAATCACATGACACCACTGGTGCAGTAAAGTTGGCAGATGAAGAGCCACTACAAAATAGTACATCCAGTAGGATGAGAGAATGTGTTTTAGCAGATCCAATGCTTTCAATGCAGGACTCCACAAAGCCTGATGAACTCCTGAGCCCTCCATATAAAGACATAGATATGATCCATGCGAAATTACGTGCCTCAGATGACCTGGGCATTGTGGACATTGATTCAGAGATAAAAGATCACCTAGTTTGGAGTTTATATGCCGCTGATATATACAAAAATATACGTGTCACAGAGCATGAAAGGAGACCATCAGCCGATTACACGGACAAGTTGCAGCAAGATATCACTCCAAACATGCGGGCAATTCTAATTGATTGGCTTGTGGAGGTTTCTGAAGAATATAAGCTGGTTCCGGACACTCTTTACCTTACAGTAAATCTCATTGATCGGTTTCTATCTAAAACTTTGATTCAGAAACAAAGGCTCCAGCTGCTTGGTGTTACATGTATGCTGATTGCATCAAAATATGAAGAAATTTGTGCTCCACGAGTGGAAGAATTTTGCTTCATCACAGACAGTACTTACACAAGAGGAGAGGTACTGAAAATGGAGCGTGAGGTTTTGAATCTCCTGCATTTTCAATTATCTGTTCCCACCATCAAAACATTTCTCAGGTATAAACCTGTCTGCTTATCAATTTATCCTGTTATACAGGCTCATTGTGTTGAACTGGAATACCTAGCAAATTATTTAGCAGAGCTTACTCTTGTCGAATACAGCTTCCTGAAGTTCCTGCCTTCCCTGATTGCTGCATCTGCTGTGTTTCTTGCCAGATGGACGCTCAACCAGTCAGACCACCCATGGAACCCAACTCTGCGGCACTACACAAATTACGAAGTGTCAGATCTTAAAACTACAGTTCTTGCATTGGAAGATCTACAGCTTAATACCAAAGGGTGTACCCTGAATGCCGTACGCGAAAAGTACAAACAAAAGAAGGTACTAAGAGCTGGTTTGGATAAACTCATAATGGTAAATGTATTTAGTTTACTGAAACTGGTTGTGAAGTAG 1491 0.4138 MDKENKICAKHEERPVRITRARARALGSIGGIPPSSRPSFKPEQKRVLRANYKRGASDENKTSAAAPAVLQHKRKAVLTDVTNINEISYNNNIINASKFQARRGHTRKNMKLAAEVSREVPSIQEDVKTKLAEELSKIRMVESHDTTGAVKLADEEPLQNSTSSRMRECVLADPMLSMQDSTKPDELLSPPYKDIDMIHAKLRASDDLGIVDIDSEIKDHLVWSLYAADIYKNIRVTEHERRPSADYTDKLQQDITPNMRAILIDWLVEVSEEYKLVPDTLYLTVNLIDRFLSKTLIQKQRLQLLGVTCMLIASKYEEICAPRVEEFCFITDSTYTRGEVLKMEREVLNLLHFQLSVPTIKTFLRYKPVCLSIYPVIQAHCVELEYLANYLAELTLVEYSFLKFLPSLIAASAVFLARWTLNQSDHPWNPTLRHYTNYEVSDLKTTVLALEDLQLNTKGCTLNAVREKYKQKKVLRAGLDKLIMVNVFSLLKLVVK 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00534 496 SMART Cyclin_C_2 358 482 IPR004367 -
Bach12g00534 496 FunFam Mitotic cyclin 6 243 343 - -
Bach12g00534 496 Gene3D - 229 476 - -
Bach12g00534 496 SUPERFAMILY Cyclin-like 357 478 IPR036915 -
Bach12g00534 496 FunFam Cyclin A1 345 477 - -
Bach12g00534 496 CDD CYCLIN_AtCycA-like_rpt2 358 473 - -
Bach12g00534 496 Pfam Cyclin, N-terminal domain 229 356 IPR006671 -
Bach12g00534 496 Pfam Cyclin, C-terminal domain 358 476 IPR004367 -
Bach12g00534 496 PIRSF Cyclin_A_B_D_E 35 481 IPR046965 GO:0016538|GO:0044772
Bach12g00534 496 PANTHER CYCLINS 182 471 IPR039361 -
Bach12g00534 496 SMART cyclin_7 265 349 IPR013763 -
Bach12g00534 496 SMART cyclin_7 371 452 IPR013763 -
Bach12g00534 496 ProSitePatterns Cyclins signature. 260 291 IPR006671 -
Bach12g00534 496 SUPERFAMILY Cyclin-like 218 355 IPR036915 -
Bach12g00534 496 Gene3D - 243 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00534 Bach-Chr12 3625572 3629423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00534 3 478 Core Cell Cycle Gene Families AT5G25380 51.139 6.71e-146 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00534 K06627 - gmx:547780 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01911 3 27185096 27189299 Bach12g00534 12 3625572 3629423 BWGD
Bach12g00534 12 3625572 3629423 Bach12g00534 12 3625572 3629423 ECH