Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00529 ATGAATCGGAGAAGATGGGTGTTACAGCAAAGAAATGGAAAAAAAATGATCAAACTGACCCACCTGAAGACCCCCATAGTCACTTTACAAGTAGGTCTTGAGAATGAACTATACAAGTTCAAGCGAGAAGAATCAGAACAATTTGCAGCATGGGCTATACTGTCAGCTCGTGCTTCTGACAGCATGTCTCAGACTAACTGGGAAGCTGATAAGATGTTAGATGTTTACATCCATGATTACCTAGTAAAGAGGGATTTGAAAGCTTCTGCTCAGGCTTTTCAAGCTGAAGGAAAAGTATCATCGGATCCTGTTGCTATTGATGCACCAGGAGGTTTTCTTTTTGAATGGTGGTCAGTTTTCTGGGATATATTTATTGCCAGGACTAATGAGAAGCACTCAGAGGTTGCTGCATCGTATATTGAGACACAGTTAATTAAGGCAAGGGAGCAGCAGCAGCAGCAACAACAACAAACGCAGCAACAGCAGCCACAAACCCAGCAGTCACAACATCAACAGCAGCAGCACATGCAGATGCAACAGCTTCTGTTACAGAGGCATGCTCAACAGCAGCAGCAGCAACAACAACAGCAACAGCAACAGCAGCAACAACAGCAACCACAGCAGCAGCAGCAACAACAACCACAACCACAACAACAGCAGCGAAGGGATGGAGCTCATCTCCTAAATGGCACCACAAATGGGTTGGTAGGAAATGACCCACTCATGCAGCAGAACCCTGGAACTGCAAATGCTTTAGCAACAAAGATGTATGAGGAAAGGCTAAAACTGCCCCTTCAGAGGGATTCTTTGGATGATGCAGCAATGAAGCAAAGATTTGGTGAGAACATGGGTCAACTCTTGGACCCGAATCATGCCTCAATATTGAAGTCAGCTGCAGCTTCTGCCCAGCCATCAGGGCAAGTGTTGCATGGTGCTGCTGGGGGAATGTCTCCACAAGTTCAAGCTCGTAGTCAGCAATTACCAGGATCTACTCTGGATATAAAGCCTGAGATCAATCCTGTTTTAAATCCAAGAGCTGCAGGTCCGGAAGGATCTTTGATGGGAATTCCTGGATCTAATCAAGGTAGCAACAATTTGACTCTAAAAGGGTGGCCGCTCACTGGGTTGGATCAGCTACGCTCTGGTCTTCTGCAGCAGCAGAAGCCATTTATACAGGCTCCTCAGCCCTTTCATCAACTTCAAATGTTGACACCACAGCATCAGCAACAGCTTTTGCTTGCACAACAGAGTTTGGCATCGCCATCTGGCAGTGATGAGAACAGAAGACTCAGAATGCTATTGAATAACAGGAATATGGGCCTTAGTAAGGATGGTCTTTCAAATCCTGTTGGTGATGTGGTTCCCAATGTAGGATCACCTCTTCAAGCTGGTGGCCCTCTTTTGCCTCGTGGAGATACAGAGATGCTAATGAAGTTAAAATTGGCTCATTTACATCAGCAACATCAGAGCACCAATCCACAGCAGCAGCAACTTTCACAGCATCCTCTTTCTAATCAGCAATCTCAGTCTTCCAGTCATAACATGCATCAGCAAGATAAAGTGGGTGGTGGCGGCAGTGTCACTGTGGATGGTGGCATGTCAAACTCATTCCGTGGGAATGATCAGGTTTCCAAAAACCAGACTGGGAGAAAGAGAAAACAGGCTGTATCTTCTTCTGGACCTGCCAATAGCTCGGGAACAGCTAATACTGCAGGCCCATCTCCTAGTTCGGCACCATCAACTCCTTCAACTCATACACCAGGAGATGTGATGTCAATGCCTGCTTTGCCTCATAGTGGTAGTTCTTCAAAGCCTCTAATGATGTTTGGCACTGATGGCACTGGAACGTTGACATCACCTTCAAACCAGTTGGCTGACATGGATCGTTTGGTGGAGGATGGATCTCTTGATGATAATGTTGAGTCTTTTTTATCCCATGATGATGCAGACCCTAGAGATCCTGGTCGTTGTATGGATGTAAGCAAAGGCTTCTCATTTAACGAGGTAAATTCTGTACGAGCAAGCACAAGTAAAGTTGTTTGTTGCCACTTCTCATCTGATGGAAAATTACTTGCTAGTGGCGGCCATGATAAAAAGGCTGTTTTATGGTACATTGATTCTCTAAAGCAAAAAACTACTCTAGAAGAACATTCATCTCTGATTACTGATGTCCGCTTCAGTCCAAGTGTTGCACGTCTTGCTACATCTTCATTTGACAAAACTGTCAGGGTTTGGGATGTTGAAAATCCAGGGTACACGATTCGGACCTTTACAGGACATTCTGCATCTGTTATGTCTCTAGATTTTCACCCAAATAAAGATGACCTTATCTGCTCATGTGATGGTGATGGTGAGATACGATATTGGAGTATAAACAATGGCAGCTGTGCTAGGGTCTCTAAGGGTGGCACTGCCCAGATGAGGTTTCAACCACGTTTGGGAAGGTATCTTGCTGCAGCTGCAGAAAATATTGTCTCTATACTTGATGTGGAGACGCAGGCATGCCGAAATTCATTGCAGGGGCACACAAAGCCAGTACATTCTGTGTGCTGGGACCCTTCTGGGGAGTTCCTAGCATCTGTCAGTGAGGATTCTGTCAGGGTTTGGACGCTTGGAACAGGAAGTGAAGGAGAATGTGTTCATGAGCTAAGCTGTAATGGTAATAAGTTTCACTCGTGTGTTTTCCATCCAACGTATCCGTCATTGCTGGTCATTGGCTGTTACCAGTCTTTGGAGCTGTGGAACATGAGTGAGAACAAGACAATGACACTGTCTGCTCATGAAGGACTTATTGCTGCATTGGCTGTGTCAACTGCATCTGGTTTGGTTGCTTCGGCCAGTCATGACAAGTTTGTCAAGCTCTGGAAGTAACACTGGTTGCATCACAGTACAGGATTAGGAATTATCAGTGTTGATCTCAGAATATGCTTGTAGTTCGGTTTCCCTTTTTTGTTGCTCGATCTACCCAGTCTTTTTGGGGCCTGTCTCATCTTCTATGTAATCTCTAGAAACTTTACCTTTGTAATATTGTCATGTTTGTGTTTTTACCTCTTTCCTGCTCCTGCTTCATTTTCATGGATTCTGATTCTGAACTGTCAAAGATGTTATGGTCTGCAAATCACTTCCAAGCCTAATTCTAAACTTGTGGTATCTTATTGTTGCCAAAACTATAGGATATACCCCTTATTT 3189 0.4462 MNRRRWVLQQRNGKKMIKLTHLKTPIVTLQVGLENELYKFKREESEQFAAWAILSARASDSMSQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSEVAASYIETQLIKAREQQQQQQQQTQQQQPQTQQSQHQQQQHMQMQQLLLQRHAQQQQQQQQQQQQQQQQQQPQQQQQQQPQPQQQQRRDGAHLLNGTTNGLVGNDPLMQQNPGTANALATKMYEERLKLPLQRDSLDDAAMKQRFGENMGQLLDPNHASILKSAAASAQPSGQVLHGAAGGMSPQVQARSQQLPGSTLDIKPEINPVLNPRAAGPEGSLMGIPGSNQGSNNLTLKGWPLTGLDQLRSGLLQQQKPFIQAPQPFHQLQMLTPQHQQQLLLAQQSLASPSGSDENRRLRMLLNNRNMGLSKDGLSNPVGDVVPNVGSPLQAGGPLLPRGDTEMLMKLKLAHLHQQHQSTNPQQQQLSQHPLSNQQSQSSSHNMHQQDKVGGGGSVTVDGGMSNSFRGNDQVSKNQTGRKRKQAVSSSGPANSSGTANTAGPSPSSAPSTPSTHTPGDVMSMPALPHSGSSSKPLMMFGTDGTGTLTSPSNQLADMDRLVEDGSLDDNVESFLSHDDADPRDPGRCMDVSKGFSFNEVNSVRASTSKVVCCHFSSDGKLLASGGHDKKAVLWYIDSLKQKTTLEEHSSLITDVRFSPSVARLATSSFDKTVRVWDVENPGYTIRTFTGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCARVSKGGTAQMRFQPRLGRYLAAAAENIVSILDVETQACRNSLQGHTKPVHSVCWDPSGEFLASVSEDSVRVWTLGTGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTMTLSAHEGLIAALAVSTASGLVASASHDKFVKLWK 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00529 956 ProSiteProfiles Trp-Asp (WD) repeats profile. 757 799 IPR001680 GO:0005515
Bach12g00529 956 Pfam LisH 71 97 IPR006594 GO:0005515
Bach12g00529 956 Pfam WD domain, G-beta repeat 919 956 IPR001680 GO:0005515
Bach12g00529 956 Pfam WD domain, G-beta repeat 711 746 IPR001680 GO:0005515
Bach12g00529 956 Pfam WD domain, G-beta repeat 835 869 IPR001680 GO:0005515
Bach12g00529 956 Pfam WD domain, G-beta repeat 753 790 IPR001680 GO:0005515
Bach12g00529 956 Pfam WD domain, G-beta repeat 671 703 IPR001680 GO:0005515
Bach12g00529 956 MobiDBLite consensus disorder prediction 155 180 - -
Bach12g00529 956 ProSiteProfiles LIS1 homology (LisH) motif profile. 69 101 IPR006594 GO:0005515
Bach12g00529 956 SUPERFAMILY WD40 repeat-like 666 956 IPR036322 GO:0005515
Bach12g00529 956 ProSitePatterns Trp-Asp (WD) repeats signature. 733 747 IPR019775 -
Bach12g00529 956 MobiDBLite consensus disorder prediction 484 521 - -
Bach12g00529 956 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 714 749 - -
Bach12g00529 956 MobiDBLite consensus disorder prediction 227 246 - -
Bach12g00529 956 CDD WD40 668 956 - -
Bach12g00529 956 MobiDBLite consensus disorder prediction 483 621 - -
Bach12g00529 956 SMART Lish 69 101 IPR006594 GO:0005515
Bach12g00529 956 Gene3D - 808 956 IPR015943 GO:0005515
Bach12g00529 956 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 924 956 - -
Bach12g00529 956 MobiDBLite consensus disorder prediction 529 588 - -
Bach12g00529 956 Coils Coil 178 205 - -
Bach12g00529 956 Gene3D - 650 807 IPR015943 GO:0005515
Bach12g00529 956 ProSiteProfiles Trp-Asp (WD) repeats profile. 714 749 IPR001680 GO:0005515
Bach12g00529 956 PANTHER TRANSCRIPTION ACTIVATOR MSS11 55 956 - -
Bach12g00529 956 ProSiteProfiles Trp-Asp (WD) repeats profile. 924 956 IPR001680 GO:0005515
Bach12g00529 956 FunFam Transcriptional corepressor LEUNIG 800 956 - -
Bach12g00529 956 ProSiteProfiles Trp-Asp (WD) repeats profile. 672 713 IPR001680 GO:0005515
Bach12g00529 956 MobiDBLite consensus disorder prediction 596 621 - -
Bach12g00529 956 SMART WD40_4 665 704 IPR001680 GO:0005515
Bach12g00529 956 SMART WD40_4 750 790 IPR001680 GO:0005515
Bach12g00529 956 SMART WD40_4 876 915 IPR001680 GO:0005515
Bach12g00529 956 SMART WD40_4 917 956 IPR001680 GO:0005515
Bach12g00529 956 SMART WD40_4 707 746 IPR001680 GO:0005515
Bach12g00529 956 SMART WD40_4 832 870 IPR001680 GO:0005515
Bach12g00529 956 ProSiteProfiles Trp-Asp (WD) repeats profile. 839 879 IPR001680 GO:0005515
Bach12g00529 956 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 757 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00529 Bach-Chr12 3589814 3600670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00529 751 955 Miscellaneous Gene Families AT5G08390 25.238 4.46e-13 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Bach12g00529 WD40 0.038 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00529 - - pvy:116133053 1253.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00529 12 3589814 3600670 Bach12g00529 12 3589814 3600670 ECH