Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00520 ATGAAGAAGATGCTAGGAATTTCAGTATGTCGGAAAACAGGGGACCAAGAATTGGACATAGAGCAGATTTCCAGGGACGACGGTAGCTGCAGTAGCCTTGCCGGTGTCCCACTTCCTGCTCTTGGCGCCAATGCCAGCAAGATTCGAAGACACAAGCTCCAACCATTTATTGTCTCTCCCTATAATGCTCGTTACAGACTCTGGCAGACATTTTTGGTCCTTTTAGTTTTCTACACAGCTTGGGTTAGCCCGTTTGAATTTGGATTCCTTCCGGAATTACCGATAAGTCTTGCTATAACTGATAACATTGTGAATGGATTTTTTGCCATTGACATTGTTCTAACCTTTTTCGTTGCCTACCTTGACAAATCTAGTTATCTACTCATTGATAGCCCAAAACTGATTGCTTCGAGGTATGCCAAAACCTGGTTGGCCTTTGATGTCATCTCTACCATCCCTTCTGAAGTTGTTCGGACTTTTTTGCCTAAACATCTTCAGGCATACGGCTATTTCAGTATACTCCGTCTTTGGCGTCTTCGTAGAGTCAGTGCCATGTTTGCAAGACTAGAGAAGGACAAAAATTATAACTACTTCTGGGTCCGGTGTTCAAAGCTTACATGTGTTAGTCTATTTTCAGTGCATTTTGGTGCCTGCTTCTTCTATTTTCTTGCTGCACGTCGTAACCCAGCAAAAACATGGCGTGGACTGGTCAGTAATCTTGATGAGGAAACGGGGATAATGACACACTATATAATAGCAGTTTACTGGGCCATAGTGACTCTTTCTACGGTTGGTTATGGTGACCTGCATCCTGTAAATTCGAGGGAGATGATATTCGACATTTTCTATATTCTCTTTGGTCTTGGACTTAATGCATATCTAATAGGAAACATGACCAACTTGGTTGTTCAGGGGGCAAGTCGAACTAGGAAATATAGAGACACCGTCCAAGCTGTCATAGGTTTTTCACAACGAAATCAGTTGCCTTACCGCTTGCAAGAACAGATGCTTTCTCATTTATATATGAAGTACAGAATCGATTCAGAAGGACTGCAGCAAGAGCTTATTGATTCCCTTCCAAATGCCATTCGATCTAGTATCTCACACTTTCTCTTCTATCCATTGGTGGAAAAAGTGTATTTGTTTCGTGGGGTGTCAGATGATTTACTTTTTCAACTGGTCACGGAGATGAAGGCTGAGTATTTTCCTCCAAATGAAGACGTTATTTTGCAGAATGAAGCCCCAACAAACTTTTATATATTGGTCACTGGTAGTGCAGTAAGATATCATATCCTCTATTTTCCTTTATCATATATATTCTGTTTAGTTGTCGGTGAGGCAAGGACAGGAGAAGTAGTAGGAGAAATTAGTGTGCTATGTTTCAGGCCACAGATGTTTACAATCCGAACCAAACGGTTGAGCCAGCTTCTCCGTTTGGACCGTGTTTCATTTCTAAATCTTGTTAAGGCAAATGTTGGAGACGGAACAATGATCATGAGCAATTTTCTTCAGCGTTTGCAAGATTTAAAAGATCCAATGATGGATCGAGTTCTGGCAGATACAGAGGCCATGATGGCTCGAGGCAAAATGGATTTGCCTACCAGCTTATGCTTTGCCGCAAGCAGAGGTAATGATCTATTGTTGCATCATTTGTTGAGGAATGGTGCAGATCCAAATGAAGCAGATAAGGATAGAAGAACCGCACTGAATATTGCAGCATCTAAAGGTAGTGTGCAATGTGTAAATCTGCTTTTAGAATATGATGCTGATCCCAACAGCAAAGATTTATGTGGAAATATCCCACTCTGGGAAGCAATGATGGGAAGGCATAAATCTGTCGTGAAGATTCTAAAGGACAATGGTGCAGACCTATTTTCTGCTGATGTAGGCCAATTTGCATGCACTGCTGTTGAGCAAAATAACTTGGAATTGCTCAAGGAACTTATTGAATATGGAGTGGATGTGTCACAGCCCAAAAGTGATGGGATCACAGCGCTTCACACTGCAGTAAGTGAAGGAAACACTGAAATTGTCAGGTTCCTTGTAGAGCACGGGGCAGACGTTGATAAGCCAGACAGTCATGGATGGACTCCAAGGGCTTTGTCAGATCAACAAGGCCAAGAAGAAATTATAAGCATCTTCCGAAACATTCAACCAGGCAAAAAACAATCAGTTATTCCCCAGTCAAAGGATAAAGTAAAGCTACACTTAGGCAGTTTTCATAGTGAAACCGCTCTGCCTTTGCCAACTACTCAATGGTCAGATCATAAGAAGCCAAAGGCTAACGATTTTCACAATTCTTTGTTTGGGTTCATGTCCTCTGCCGCTTCTGGTAAGAGAGATCCTGCTGCATCTCCAAGCAAAGATGTCGTTCCCAGGAACATGTATAGAGTAACACTTTGTTGTCCTGAGAAAGGTGAATCTGCTAGAAAGCTTATTTTTCTGCCCCATACCCTGCAAGAGCTGCTAGATGTTGGTGCAAAAAAGTTTGGTTTCTCTGCCACCAAAATTTTGACCAAAGAAGGAGCTGAAGTTGAAGACATGGCACTTATAAGAGATGGTGATTATCTTGTTCTTGCACGTGATGCTGGTCATGAACATGGACAAGATTGA 2613 0.4198 MKKMLGISVCRKTGDQELDIEQISRDDGSCSSLAGVPLPALGANASKIRRHKLQPFIVSPYNARYRLWQTFLVLLVFYTAWVSPFEFGFLPELPISLAITDNIVNGFFAIDIVLTFFVAYLDKSSYLLIDSPKLIASRYAKTWLAFDVISTIPSEVVRTFLPKHLQAYGYFSILRLWRLRRVSAMFARLEKDKNYNYFWVRCSKLTCVSLFSVHFGACFFYFLAARRNPAKTWRGLVSNLDEETGIMTHYIIAVYWAIVTLSTVGYGDLHPVNSREMIFDIFYILFGLGLNAYLIGNMTNLVVQGASRTRKYRDTVQAVIGFSQRNQLPYRLQEQMLSHLYMKYRIDSEGLQQELIDSLPNAIRSSISHFLFYPLVEKVYLFRGVSDDLLFQLVTEMKAEYFPPNEDVILQNEAPTNFYILVTGSAVRYHILYFPLSYIFCLVVGEARTGEVVGEISVLCFRPQMFTIRTKRLSQLLRLDRVSFLNLVKANVGDGTMIMSNFLQRLQDLKDPMMDRVLADTEAMMARGKMDLPTSLCFAASRGNDLLLHHLLRNGADPNEADKDRRTALNIAASKGSVQCVNLLLEYDADPNSKDLCGNIPLWEAMMGRHKSVVKILKDNGADLFSADVGQFACTAVEQNNLELLKELIEYGVDVSQPKSDGITALHTAVSEGNTEIVRFLVEHGADVDKPDSHGWTPRALSDQQGQEEIISIFRNIQPGKKQSVIPQSKDKVKLHLGSFHSETALPLPTTQWSDHKKPKANDFHNSLFGFMSSAASGKRDPAASPSKDVVPRNMYRVTLCCPEKGESARKLIFLPHTLQELLDVGAKKFGFSATKILTKEGAEVEDMALIRDGDYLVLARDAGHEHGQD 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00520 870 SUPERFAMILY cAMP-binding domain-like 307 507 IPR018490 -
Bach12g00520 870 ProSiteProfiles cAMP/cGMP binding motif profile. 381 505 IPR000595 -
Bach12g00520 870 SMART cnmp_10 381 503 IPR000595 -
Bach12g00520 870 SUPERFAMILY Ankyrin repeat 530 715 IPR036770 -
Bach12g00520 870 ProSiteProfiles Ankyrin repeat profile. 661 693 IPR002110 GO:0005515
Bach12g00520 870 PRINTS EAG/ELK/ERG potassium channel family signature 101 111 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach12g00520 870 PRINTS EAG/ELK/ERG potassium channel family signature 294 303 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach12g00520 870 PRINTS EAG/ELK/ERG potassium channel family signature 276 287 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach12g00520 870 PRINTS EAG/ELK/ERG potassium channel family signature 112 121 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach12g00520 870 PRINTS EAG/ELK/ERG potassium channel family signature 78 85 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach12g00520 870 PRINTS EAG/ELK/ERG potassium channel family signature 250 267 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bach12g00520 870 Pfam Ion transport protein 66 308 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bach12g00520 870 ProSiteProfiles KHA domain profile. 797 870 IPR021789 -
Bach12g00520 870 ProSiteProfiles Ankyrin repeat profile. 564 596 IPR002110 GO:0005515
Bach12g00520 870 Gene3D - 66 304 - -
Bach12g00520 870 ProSiteProfiles Ankyrin repeat region circular profile. 661 692 - -
Bach12g00520 870 PANTHER POTASSIUM CHANNEL AKT1 31 860 IPR045319 GO:0005249|GO:0006813
Bach12g00520 870 SMART ANK_2a 531 560 IPR002110 GO:0005515
Bach12g00520 870 SMART ANK_2a 597 626 IPR002110 GO:0005515
Bach12g00520 870 SMART ANK_2a 628 657 IPR002110 GO:0005515
Bach12g00520 870 SMART ANK_2a 661 690 IPR002110 GO:0005515
Bach12g00520 870 SMART ANK_2a 564 593 IPR002110 GO:0005515
Bach12g00520 870 Gene3D Jelly Rolls 352 522 IPR014710 -
Bach12g00520 870 ProSiteProfiles Ankyrin repeat region circular profile. 564 595 - -
Bach12g00520 870 Pfam Ankyrin repeats (3 copies) 636 714 IPR002110 GO:0005515
Bach12g00520 870 Pfam Ankyrin repeats (3 copies) 536 624 IPR002110 GO:0005515
Bach12g00520 870 ProSiteProfiles Ankyrin repeat profile. 531 563 IPR002110 GO:0005515
Bach12g00520 870 Pfam Cyclic nucleotide-binding domain 401 490 IPR000595 -
Bach12g00520 870 CDD CAP_ED 381 491 IPR000595 -
Bach12g00520 870 FunFam Potassium channel KAT3 67 304 - -
Bach12g00520 870 Pfam KHA, dimerisation domain of potassium ion channel 797 859 IPR021789 -
Bach12g00520 870 FunFam Potassium channel KAT2 369 510 - -
Bach12g00520 870 Gene3D - 533 716 IPR036770 -
Bach12g00520 870 SUPERFAMILY Voltage-gated potassium channels 60 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00520 Bach-Chr12 3528906 3534179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00520 13 862 Ion Channels AT2G25600 58.142 0.0 980
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00520 K21867 - gmx:100786870 1081.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01929 3 27298272 27302824 Bach12g00520 12 3528906 3534179 BWGD
Bach12g00520 12 3528906 3534179 Bach12g00520 12 3528906 3534179 ECH