Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00501 ATGGTACAGGCAAAGAAGTTCAGGGGAGTCAGGCAGCGCCAGTGGGGCTCCTGGGTGTCAGAAATTCGCCACCCTTTACTGAAGAGAAGGATATGGCTAGGCACATTTGAGACAGCAGAGGCTGCAGCAAGGGCATATGACCAAGCTGCCATTTTGATGAATGGTCAAAATGCAAAGACCAATTTCCCTCCTGCATCAAAGAATCAACCTGATCAGGTTGATGACCCTTTCTTATCTCCCAAGGCTCTCTCAGAGCTCTTGAGGTCAAAGCTCCGCAAGTGTTGCAAAGACCCATCTCCATCCCTCACTTGTCTGAGGCTAGATGCTGACAATTCTCACATTGGAGTGTGGCAGAAGGGAGCTGGACCACGCTCTGACTCCAATTGGGTCATGAGGGTGAAGCTTGGCAAGAAACAAGCACAAGAATTGGAGGGTAAGTCAACTTTGTCACAAGGCTCACCAGATATTGGTGGTGGTTCTGGTGCTGGTGCTGGTGCTGGTGAAGCTGCAAATTTTAACGGGGTGGATGAAGAAGACAAAGTTGCACTGCAGATGATTGAAGAGCTACTTAACTGGAACTATTATCCGTGTATTTCAAGTAATCCTCAGGAAGAAAAAGGGAACCGTACTCGTTAA 636 0.4811 MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRIWLGTFETAEAAARAYDQAAILMNGQNAKTNFPPASKNQPDQVDDPFLSPKALSELLRSKLRKCCKDPSPSLTCLRLDADNSHIGVWQKGAGPRSDSNWVMRVKLGKKQAQELEGKSTLSQGSPDIGGGSGAGAGAGEAANFNGVDEEDKVALQMIEELLNWNYYPCISSNPQEEKGNRTR 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00501 211 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Bach12g00501 211 SUPERFAMILY DNA-binding domain 6 63 IPR016177 GO:0003677
Bach12g00501 211 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Bach12g00501 211 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Bach12g00501 211 Pfam AP2 domain 6 55 IPR001471 GO:0003700|GO:0006355
Bach12g00501 211 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Bach12g00501 211 MobiDBLite consensus disorder prediction 141 171 - -
Bach12g00501 211 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Bach12g00501 211 Gene3D AP2/ERF domain 5 64 IPR036955 GO:0003700|GO:0006355
Bach12g00501 211 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 4 150 - -
Bach12g00501 211 FunFam Ethylene-responsive transcription factor 2 5 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00501 Bach-Chr12 3411493 3412314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00501 1 192 AP2-EREBP Transcription Factor Family AT5G25390 57.949 1.34e-73 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach12g00501 AP2 3.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00501 - - qsa:O6P43_015692 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00501 12 3411493 3412314 Bach12g00501 12 3411493 3412314 ECH
Bach5g00600 5 4017348 4018129 Bach12g00501 12 3411493 3412314 ECH
Bach2g01816 2 26360366 26361161 Bach12g00501 12 3411493 3412314 ECH