Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00496 TAAACCCCTTCTCTGCCGTCTGTTGTATGTGCTAATTAGCTTGTGGTACCACATGGAACTTTGCTTAAGTCTGGCTCTCCCAACCCACAATCCAACTGAGGGATTCGACCAAACAAACCATGTCTTAGAGTCAAAACAGATGGTGGGTTCAGAATTATGGACACCAAGTTCCCATTTGGAAAGCCAAAAGCATGTCAGAAACAAGCGTGGCTTCCAAGATTCCTTTGGACATTCTTTCAAACCTGTGTCTTCAGACTCTCTACTGGTATGGAGCGGACAACCAAATGAAGAAGATGAGCGCAATGGAAAGAATAAAAGGAACACTGACACAACAAACAAGAATGATGAAGAAAAAAATCAAGTGGTGGGTTGGCCACCCATTAAAGCATGGAGGAAGAAGAAACTCCATCTCCATCAGCATCATGGAGACCAGATCAGAAATGAAAGGGGGCCAGCAGAAAGAAGAGGATCAAACTCCTTATACGTCAAGGCCAAGATGGAAGGGGTAGCAATAGGAAGGAAGATTGATGTGAGGCTCTATAACTCTTATCAGACTCTGACAAACACGTTGATCAGTATGTTTGCCGATTACCAAAAATTTCAGGAAGAAGGAGCAAGTTATACACTCACCTATCAAGACAAAGAAGGAGACTGGCTACTTGCTGGGGATGTTCCGTGGCAATCCTTCATCGATTCCGTGCAGCGTTTGGAGATATTAAGGAATGGCAATACAACTACTTGACACTGTGCAATTGCAATTTACAAATGTTGAACTAGATTATGTGTGCTAGTTTTGGGAAGAATTATATGCTTGAATCGATTGTAGAGAACCAAAAATTAAAAGATGAATATGTCTTGGATAGAAGAAAGCCTAACAGAGGGAAATAGAAAGCAGACCTTATTCTCGATTGTATGCAATACAAATTATAGATCAATATGCCGATGTACCGGTTATCCACTTGCTACTTGCAGGTCCTTCTACACTATTGGAGGATGCAATCAAATATTTCATAAACAATGTAAATAAATTTTCATCATTTGTTAATCATATATTTAA 1057 0.4011 MELCLSLALPTHNPTEGFDQTNHVLESKQMVGSELWTPSSHLESQKHVRNKRGFQDSFGHSFKPVSSDSLLVWSGQPNEEDERNGKNKRNTDTTNKNDEEKNQVVGWPPIKAWRKKKLHLHQHHGDQIRNERGPAERRGSNSLYVKAKMEGVAIGRKIDVRLYNSYQTLTNTLISMFADYQKFQEEGASYTLTYQDKEGDWLLAGDVPWQSFIDSVQRLEILRNGNTTT 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00496 229 ProSiteProfiles PB1 domain profile. 142 229 IPR000270 GO:0005515
Bach12g00496 229 Pfam AUX/IAA family 5 226 IPR033389 -
Bach12g00496 229 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 21 224 IPR003311 GO:0005634|GO:0006355
Bach12g00496 229 MobiDBLite consensus disorder prediction 69 100 - -
Bach12g00496 229 SUPERFAMILY CAD & PB1 domains 135 221 - -
Bach12g00496 229 MobiDBLite consensus disorder prediction 79 99 - -
Bach12g00496 229 Gene3D - 137 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00496 Bach-Chr12 3374535 3376011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00496 144 222 B3 DNA Binding Superfamily AT1G19220 38.750 1.57e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bach12g00496 AUX_IAA 5.8e-43 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00496 K14484 - qsu:111986606 254.218