Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00476 ATGGGGAAGCCAACTGGGAAGAAGAAGGATGTTGTTGCCCAGAAGGCTGCAAATGCAAACAGCAAGCCTTCTTCTGAGAAGACCTCCAAATCTTTTGATGAAGACACAGCAATGTTCATCAACATGTCACAAGAGCTCAAGGAAGAAGGTAACAAACTATTTCAGAGGAAGGATCATGAAGGCGCTATGTTGAAGTATGAGAAGGCCCTCAAGCTCCTTCCTAGAAACCATATCGATGTCGCTCACCTCAGGAGCAATATGGCATCCTGTTTTATGCAATTGGGTCTTGGGGAATACCCTCGAGCAATTAGCGAATGTAATTTAGCATTGGAAGTATCACCAAGATATAGTAAAGCTCTGTTGAAAAGGGCAAAGTGCTATGAAGAATTGAATCGGTTGGATTTGGCACTGAGAGATATTAATACTGTTTTGAGCGTGGAGCCTAGTAATCTTACTGCATTGGACATGCTGGAGAATGTGAAAAAGACGATGGAAGAAAAGGGTATCACTGTTGATGAGAAAGAGATTGGCTTAGCTAGTGTTGAGCACCCTGCTTCTCGTTTTCGTAAAGTGGTAAAAGAGAATTTGAGGAAAAAGAAAAATAAAAAAATTGACGACAAGGCAGAGGATAAGGCGGTTGTTCAGGAGAATGTGAATGCTGTTAAGGATAAAGAAGTGGTTACAACAACTATTGAGGAAGAAAAACTTGTAGTTGAACCTGTTAAGGAAGAAAAAGTGGTCACAAGGACAGTGAAGTTGGTACATGGAGAGGATATAAGGTGGGCACAGTTACCAGTGAATTGTAGTGTGAGGTTGGTAAGGGATATTGTTAGGGATCGGTTTCCAGGATTGAAGGGTGTTCTTGTGAAGTACAGGGATCAGGAAGGTGATTTGGTTACAATCACTACTACTGATGAATTAAGGCTAGCTGAATCTTCAGGTCAGGGCCCCCTTGGCTCACTTCGGTTCTTTATTACCGAAGTTAATCCAGACCAGGAACCACTATATGATGAAATAACCAATGACGATGAGTTGCAAACTCGTGCTGGAAAAATGAGTGGTATTACCGAGAATGGGGTTACGGAAGAAGGCTGTGATGTAACAAATAGGAAGTCAACTGTGGAGGACTGGATAATTCAGTTTGCAAGGTTGTTCAAGAACCATGTTGGGTTTGATTCTGATGAATATTTGGATCTTCACGAGCTTGGAATGAAGCTATATACAGAAGCAATGGAGGAGGCAGTGACAAGTGATGACGCTCAAGAACTTTTTGAAATTGCTGCAGATAAATTTCAAGAGATGGCAGCCTTGGCAGTATTTAATTGGGGAAATATCCACATGTCCAGGGCAAGGAAGCGGGTTTCCTTTCCAGAAGACGGGTCAAGGGAATCTACTTTTGAGCATATTAAAGCTGCTTATGAGTGGGCTCAAAAGGAGTACATGAAAGCAGAAATGAGATATGGAGAAGCCTTGAAAATCAAACCAGACTTTTATGAGGGATTTCTTGCTCTTGGGCATCAGCAGTTTGAGCAAGCAAAGCTCTGCTGGTATTATGCAATAGCATGCAAGATGGATTTAGAAGCTGGCTCTTCTGATGAGGTTCTACAGCTCTACAACAAGGCTGAGGACAACATGGAGAAAGGCATGTTGTTGTGGGAGGAGATGGAGGAGCGGCGTTTAAATGGACTATCAAAATCAGATAAATTTAAAGCCCATATAGAGAAAATGGGCTTAGATAGTCTTTTCAAAGACATCTCTTCTGATGAAGTTGCAGAGCAGGCTGCAAACATGAGATCACAAATATATCTTTTATGGGGTACCTTATTGTATGAACGTTCTGTTGTTGAATATAAGCTAGGCCTACCAACATGGGAAGAATGTTTGGAGGTTGCAGTCGAGAAGTTTGAACTTGCTGGAGCTTCTCCAACAGATATAGCTGTCATGGTAAAGAATCATTGTTCCAATCAAACAGCACTAGAAGGTTTGGGGTTCAAAATTGATGAGATTATTCAAGCATGGAATGACATGTATGATGCCCAGAGGTGGCAGTTTGGTGTTCCTTCTTTCCGACTTGAGCCATTATTTCGTCGGCGCGTTCCAAAACTTCATTACCTATTGGAGCAATTTTGAGTTCTTTTTTTTTGAGTTTGGAATTCTTTGGAGGCATCATTAATGCTTCTGTTTTCTTGGCTTTATAGGGATTTTTCCTCAGTGCTGCATTTGTTTAGCTTATGAATTGGAGCAAGAGTGGATTTTTCTTTTTCTTTCCTTTGTGCGAGTTGCATGCAAGATTGAGAAAGTATATTGTATTCATTTTTTTGGGGGATTTGCTGCAAAGTCTCTGTCGTTTACAGCTGTAATGTAATATGGGTATATGATTGCATTTATTGGTGTGAGCTAGTTGGCGTAAGCTTTAATTTGTTCAGTTTGCTGATTAGTCGG 2442 0.4107 MGKPTGKKKDVVAQKAANANSKPSSEKTSKSFDEDTAMFINMSQELKEEGNKLFQRKDHEGAMLKYEKALKLLPRNHIDVAHLRSNMASCFMQLGLGEYPRAISECNLALEVSPRYSKALLKRAKCYEELNRLDLALRDINTVLSVEPSNLTALDMLENVKKTMEEKGITVDEKEIGLASVEHPASRFRKVVKENLRKKKNKKIDDKAEDKAVVQENVNAVKDKEVVTTTIEEEKLVVEPVKEEKVVTRTVKLVHGEDIRWAQLPVNCSVRLVRDIVRDRFPGLKGVLVKYRDQEGDLVTITTTDELRLAESSGQGPLGSLRFFITEVNPDQEPLYDEITNDDELQTRAGKMSGITENGVTEEGCDVTNRKSTVEDWIIQFARLFKNHVGFDSDEYLDLHELGMKLYTEAMEEAVTSDDAQELFEIAADKFQEMAALAVFNWGNIHMSRARKRVSFPEDGSRESTFEHIKAAYEWAQKEYMKAEMRYGEALKIKPDFYEGFLALGHQQFEQAKLCWYYAIACKMDLEAGSSDEVLQLYNKAEDNMEKGMLLWEEMEERRLNGLSKSDKFKAHIEKMGLDSLFKDISSDEVAEQAANMRSQIYLLWGTLLYERSVVEYKLGLPTWEECLEVAVEKFELAGASPTDIAVMVKNHCSNQTALEGLGFKIDEIIQAWNDMYDAQRWQFGVPSFRLEPLFRRRVPKLHYLLEQF 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00476 709 CDD PB1 250 326 - -
Bach12g00476 709 SUPERFAMILY CAD & PB1 domains 247 339 - -
Bach12g00476 709 Gene3D - 235 327 - -
Bach12g00476 709 Gene3D Tetratricopeptide repeat domain 40 169 IPR011990 GO:0005515
Bach12g00476 709 ProSiteProfiles TPR repeat profile. 117 150 IPR019734 GO:0005515
Bach12g00476 709 PANTHER PROTEIN CLMP1 1 707 IPR044517 -
Bach12g00476 709 SMART tpr_5 43 76 IPR019734 GO:0005515
Bach12g00476 709 SMART tpr_5 464 497 IPR019734 GO:0005515
Bach12g00476 709 SMART tpr_5 117 150 IPR019734 GO:0005515
Bach12g00476 709 SMART tpr_5 81 116 IPR019734 GO:0005515
Bach12g00476 709 SMART PB1_new 248 328 IPR000270 GO:0005515
Bach12g00476 709 ProSiteProfiles TPR repeat profile. 43 76 IPR019734 GO:0005515
Bach12g00476 709 SUPERFAMILY TPR-like 33 165 IPR011990 GO:0005515
Bach12g00476 709 ProSiteProfiles PB1 domain profile. 248 328 IPR000270 GO:0005515
Bach12g00476 709 SUPERFAMILY TPR-like 392 546 IPR011990 GO:0005515
Bach12g00476 709 MobiDBLite consensus disorder prediction 1 33 - -
Bach12g00476 709 Pfam PB1 domain 248 326 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00476 Bach-Chr12 3262859 3266808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00476 26 150 Calmodulin-binding Proteins AT3G25230 30.597 5.16e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00476 K26538 - qsa:O6P43_015720 1076.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01983 3 27594151 27596398 Bach12g00476 12 3262859 3266808 BWGD