Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00465 ATGGCCAGACCACAACAGCGATACCGAGGCGTCCGACAAAGGCATTGGGGGTCTTGGGTCTCTGAAATTCGGCACCCTATATTGAAGACTAGAATTTGGCTAGGTACTTTCGAGACGGCTGAAGATGCAGCTCGAGCCTATGATGAAGCCGCAAGGCTAATGTGTGGACCGAGGGCACGGACCAATTTCCCTTACAACCCCAATGCGTCTCAATCATCAACTTCAAAGCTTCTCTCAGCAACCTTGACGGCTAAACTGCATAGGTGCTACATGGCTTCGCTGCAAATGACTAGACCATCATTACCAGAGCCTCAGAGGGTTTCTTTTCCGAATGTTATTTCCACAGGCAAAAGCAACTTGGTTGATAAAACCAGCGAAACAAATACAATGTTGCCAGAGAAGAGGCCATCGGCGGTGGCAGAGCAAGAGTCAGAGGTGAACTGGGTTGCGAAGAAGATTAAAGTGGAAAATATTCAGCAGTTCAAGCCTCTTGAAGAAGATCATATAGATCAAATGATAGCAGAGCTCCTTGATTATGGGTCTATTGAGCTCTGCTCTCTGTGA 564 0.4734 MARPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYNPNASQSSTSKLLSATLTAKLHRCYMASLQMTRPSLPEPQRVSFPNVISTGKSNLVDKTSETNTMLPEKRPSAVAEQESEVNWVAKKIKVENIQQFKPLEEDHIDQMIAELLDYGSIELCSL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00465 187 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Bach12g00465 187 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Bach12g00465 187 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Bach12g00465 187 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Bach12g00465 187 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 137 - -
Bach12g00465 187 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Bach12g00465 187 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Bach12g00465 187 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Bach12g00465 187 SUPERFAMILY DNA-binding domain 7 66 IPR016177 GO:0003677
Bach12g00465 187 FunFam Ethylene-responsive transcription factor 2 6 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00465 Bach-Chr12 3167033 3167696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00465 1 187 AP2-EREBP Transcription Factor Family AT5G25190 64.171 1.77e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach12g00465 AP2 4.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00465 - - qsa:O6P43_019253 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01993 3 27688011 27688685 Bach12g00465 12 3167033 3167696 BWGD
Bach12g00465 12 3167033 3167696 Bach12g00465 12 3167033 3167696 ECH