Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00459 TTATAGTGTAAAGGTTAAGTCCTTTAAACTCTCTTTCCATTGTCACTTGTGAATTCTACTGTGGAGAAAATGATCGTGGAGACTAGAATGGATGATCCCAGAGATCAGTTTCCTGTAGGAATGCGTGTTCTTGCCGTTGACGATGATCCTACTTGTCTCTTGGTGTTGGAAACTCTGCTTCGAAGATGTCAATATCATGTAATGACAACTAGTCAGGCAACAATGGCGTTGAAGATGTTGAGAGAAAACAAAGATAAGTTTGACCTGGTCATCAGCGATGTTCACATGCCAGACATGGATGGATTTAAGCTGCTTGAGCTTGTGGGACTTGAGATGGACCTCCCTGTCATAATGTTGTCTGCAAATGGTGATCCGAAGCTGGTGATGAAGGGAATAACTCATGGAGCTTGTGATTATCTGCTGAAACCTGTTCGAATTGAGGAGCTAAAGAACATTTGGCAGCATGTAATCAGGAGGAAGAAATTTGACACAAAAGATCAGAACAATGGCACCAACCAAGATAAAGCTCATTCTGGTAATAGCAATGGACTGAGGTCAGCAGGCAATGGGAATTCAGATCAAAATGGAAAGCTGAACAAAAAACGGAAGGATCAAAATGAAGAAGAAGAAGAGGAAAATGAGAATGACCATGAAAATGATGACCCTTCAACCCAGAAGAAGCCTAGAGTTGTTTGGTCTGTGGAGCTGCACCGCAAGTTTGTTGCTGCTGTTAATCAGTTAGGCATTGATAAGGCTGTACCAAAGAAAATACTTGATTTGATGAATGTTGAAAAGCTTACAAGGGAGAATGTAGCAAGTCATCTCCAGAAATATAGGCTTTATCTGAAGAGAATTAGCTGTGTAGCAAACCAACAGGCTAATATGGTGGCAGCTTTAGGTAGTGCAGATCCATCCTATTTGAGAATGAGCCCTCTGAATGGGCTTGGACATTTACAAACATTGAATGGTTCTGGGCAGTTTCAGAACAGTGTTTTCAGATCCTTCCCATCTAGTGGGATGATTGGTAGATTGAACACTCCTGCTGGTCTTGGTGTGCATGGGTTGCCTTCTTCTGGAATTCTTCCATTGGGTCAAGGCCAAAATTTAAACAATTCCATGAATGATCCACTCAAGTTCCCGTCAACCATAGTTGGTGGTAATCAGAATGCTAGTACAATTCAGGGAATGCCAGTGTCTACAGGGCTTGATCAATTACGGCAAAATAAGGCCATTACTTCTGTTGAAGATCTGACCACTGTTGTTGATGATAAAACAACTTTGGCCATCCCAAATAAACTAACAGATCTAAGAGTCCGCACACCACTTGTGGGTGTCACAAATAACTCGTTGATGTTAGAAACACATACTCAAGGCACACAAGGGGGTAGAGGATATGAGAATCTATCTTCAGTAGCCTCTCAACATCCGGAGTTTTCTTTGCCTTTACTGGATCATGGTAGGTGTAGTGATAATTGGTCAACTGCTGTGCAGTCATCTGGGATCCAACCAAATTCTTCTTACCCATCCACTCAGTGTTTTAGACAGGCTGCTATACCTACTACAGATAACATGCATTCGAAAGTCTTGCATGTGGGAAATCCAGGTGCTGCTTCATCCATCACTTCACTCTCCACTCAATCCATTGATTCAGTAACAGATATGCATTCTCAAGGACCCATTTTTACTAATAAACCTGCTCAAATTAGCAGCAACAACGCCCTTTTTCAAGGCTGGGATGACCATAACCAGGATACTGATTTCCATTCGATGAATTCTCTCATTCCTACCTCAGGCCATGCCCCCACAAACTCCGCTTTCCACGGTAATCTGGACTTTAATTTTGGTGACCTTTTACAGATGAAGCATGGTGAGGTGACGAAATCAACTAAAGAGAAACCAAATCAGGGGTATATAATGGACCAACAGAAGGCACAGCACAGTCGCATCTCTAATAACCTTGGTTCATTGGAAGATTTGGTCAGTGCAATGATGAAACAGGAACAAAATAAGGTGAAGTTAATGGAAGGAGAGTTCATATGCGATAGTTACTCTGGTGGGGCATCTATGTGAATGTGAAGGAGCAAGTTTGGTAACATAATCATGATGTGCTTGTGGATGAGTTTTGTAGAGTGATTCAAACCTCCCTTTATTTTGTTGGCACTCTTGTCTTCTCTTAATTTTCTGTAGGCCCCAGCTGCTTTTAGAATAGTTCTTTCATTTTCGTTTAATGGGAACGCATTGCTGTCTGTGGGCCCCACAATGCATTATGCAGCTAATCATGGCCTTGGTGTAAACATGCTTTGCTAAGAAAAATGTTAGTGATCCATTAATAAAGGTCATATTGCT 2346 0.4169 MIVETRMDDPRDQFPVGMRVLAVDDDPTCLLVLETLLRRCQYHVMTTSQATMALKMLRENKDKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKFDTKDQNNGTNQDKAHSGNSNGLRSAGNGNSDQNGKLNKKRKDQNEEEEEENENDHENDDPSTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSADPSYLRMSPLNGLGHLQTLNGSGQFQNSVFRSFPSSGMIGRLNTPAGLGVHGLPSSGILPLGQGQNLNNSMNDPLKFPSTIVGGNQNASTIQGMPVSTGLDQLRQNKAITSVEDLTTVVDDKTTLAIPNKLTDLRVRTPLVGVTNNSLMLETHTQGTQGGRGYENLSSVASQHPEFSLPLLDHGRCSDNWSTAVQSSGIQPNSSYPSTQCFRQAAIPTTDNMHSKVLHVGNPGAASSITSLSTQSIDSVTDMHSQGPIFTNKPAQISSNNALFQGWDDHNQDTDFHSMNSLIPTSGHAPTNSAFHGNLDFNFGDLLQMKHGEVTKSTKEKPNQGYIMDQQKAQHSRISNNLGSLEDLVSAMMKQEQNKVKLMEGEFICDSYSGGASM 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00459 666 SMART REC_2 18 130 IPR001789 GO:0000160
Bach12g00459 666 SUPERFAMILY Homeodomain-like 201 261 IPR009057 -
Bach12g00459 666 CDD REC_typeB_ARR-like 20 134 - -
Bach12g00459 666 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 201 260 IPR017930 -
Bach12g00459 666 Coils Coil 172 198 - -
Bach12g00459 666 MobiDBLite consensus disorder prediction 140 204 - -
Bach12g00459 666 Pfam Myb-like DNA-binding domain 206 256 IPR001005 -
Bach12g00459 666 PIRSF RR_ARR_type-B 1 664 IPR017053 GO:0003677|GO:0003700|GO:0009736
Bach12g00459 666 FunFam Two-component response regulator 200 263 - -
Bach12g00459 666 Gene3D - 17 155 - -
Bach12g00459 666 Pfam Response regulator receiver domain 20 128 IPR001789 GO:0000160
Bach12g00459 666 SUPERFAMILY CheY-like 17 139 IPR011006 -
Bach12g00459 666 NCBIfam myb-like DNA-binding domain, SHAQKYF class 204 257 IPR006447 GO:0003677
Bach12g00459 666 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160
Bach12g00459 666 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 384 IPR045279 GO:0009736
Bach12g00459 666 Gene3D - 200 263 - -
Bach12g00459 666 MobiDBLite consensus disorder prediction 148 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00459 Bach-Chr12 3131389 3136015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00459 1 666 Response Regulator Gene Family AT2G25180 44.065 4.24e-145 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Bach12g00459 Response_reg 1.8e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00459 K14491 - gmx:100809002 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01999 3 27723462 27727756 Bach12g00459 12 3131389 3136015 BWGD
Bach12g00459 12 3131389 3136015 Bach12g00459 12 3131389 3136015 ECH