Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00449 ATGGAATCAACTTGCGTGGATTCTTCTCTCGATCTAAACGTTGATCCTTCTCGCCACATGGATGCCGACATGTTGATGGATGAGTTACATCGTTTGAACAGTGAGAATAAGAAACTAACTGAGGCGCTGACCCATATGCGTGAGAGCTACAATGCTCTGTTGAATGATTTGAGGGAACTACTCTTAATGGACAAGAGTATCATTAATTCTCAAGAACCAACGCCCAGGAAGAGAAAGGCTACTCATGAGACTGAGAACTCGAATATCATCAAGGTGTTTGGTATTAGTGAGTGCAGTATTAGTGAGGATGAACCATGCAAAAGGCCCTGCATAGAAAGCCCCAGCACCACAACATCAAAGGTTTCAAAAGTTTTTGTACGCACTGAACCATCTGATACCAGCTTATATGTGATGGATGGATATCATTGGAGGAAATACGGTCAAAAGGTTACCAAAGATAACCCTTCTCCTAGGGCTTACTTTAAGTGCTCCTTTGCCCCAAGCTGCCCAGTAAAAAAGAAGGTGCAAAAAAGTGCAGATGACCCAGGAGTGCTGGTGGCAACTTACGAAGGAGAGCACAACCACTCTCCGACGGGCTCAAGCCAAATTAGCGAAGCCATTGCTGTTTCGTCACCCATTGCTAGAAGTAAAAGTGCAGGCCCGACGGTAACGCTTGACCTAGTCCACTCATCATCAGGGTCAGCAGGAAGAGGAGTAGTTCACAATGCCCAGAACTCCATTCACCACTTGCTGGTTCAACAAATGGCTACTTCTTTGACCAGAGATCCCAATTTCACTGCTGCACTTGCCACCGCCATTTCCGGAAGAATTTTGGATCACGCTTCTATTTAA 852 0.4542 MESTCVDSSLDLNVDPSRHMDADMLMDELHRLNSENKKLTEALTHMRESYNALLNDLRELLLMDKSIINSQEPTPRKRKATHETENSNIIKVFGISECSISEDEPCKRPCIESPSTTTSKVSKVFVRTEPSDTSLYVMDGYHWRKYGQKVTKDNPSPRAYFKCSFAPSCPVKKKVQKSADDPGVLVATYEGEHNHSPTGSSQISEAIAVSSPIARSKSAGPTVTLDLVHSSSGSAGRGVVHNAQNSIHHLLVQQMATSLTRDPNFTAALATAISGRILDHASI 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00449 283 Pfam WRKY DNA -binding domain 139 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach12g00449 283 Gene3D WRKY domain 120 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach12g00449 283 FunFam WRKY transcription factor 40 122 199 - -
Bach12g00449 283 Coils Coil 22 49 - -
Bach12g00449 283 ProSiteProfiles WRKY domain profile. 139 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach12g00449 283 SUPERFAMILY WRKY DNA-binding domain 135 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach12g00449 283 SMART WRKY_cls 137 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach12g00449 283 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 18 277 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00449 Bach-Chr12 3038272 3039720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00449 3 280 WRKY Transcription Factor Family AT1G80840 44.257 4.51e-72 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bach12g00449 WRKY 2.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00449 - - gmx:100127373 266.159