Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00423 ATGGTGAAACCGGCCATGGCTACTACTGATCAATATCATATTAACAACTTTCCTACTAATAATCCCTATTCTTCTAATGAGATCAAGTACAAAGGCGTGAGAAAACGCAAATGGGGCAAATGGGTATCTGAGATCAGGCTTCCCAACTGCCGTGACAGGATTTGGTTAGGCTCCTACGACACGCCGGAGAAGGCTGCGAGGGCTTTCGACGCAGCCCTTTACTGTCTACGAGGTCGTCGTGCCAATTTCAATTTCCCTGACACCCCTTTCGAGATTACTATTGGTGGAGCTGACCAAAGTCTCACTCCACAGGAGATTCAAGTTGTTGCAGCTAGGTTTGCTAATGAGCAGGAGCATAATAATAATAATATTAACATTATTGAAGGTGAAAGGGAAGAAGGAGAAGGGAGTCCGATGAATGGTAAAGAAGAATCCTCAGTGTCTGTTACGGGTGCATCGTTTGAAGAAAATAATAATATGGTAACACAGACAGGTTATGCCTGTGCCTCATCCTCGCCATGGTCCATGTATGATGCAAATTTGCAAGTGGAACGATATGGAGATATGGATTTTTCCTTTTTGCACATGTTGGATAATCATTCGGATGGGTTTACATCTGATCAGCTAGGCCACTATTCTGGGCTATACAAGATGCACTCCGGGGAGTTATTTTATCCAACATCACCACAACCTTATCAAGACATTAATGATCAGGTCATCGGAAATATTAATGAAGATTTTGATGATAATGCTTTTTCCCACCAATCGTTCCTTTGGAATTTCTGA 786 0.4249 MVKPAMATTDQYHINNFPTNNPYSSNEIKYKGVRKRKWGKWVSEIRLPNCRDRIWLGSYDTPEKAARAFDAALYCLRGRRANFNFPDTPFEITIGGADQSLTPQEIQVVAARFANEQEHNNNNINIIEGEREEGEGSPMNGKEESSVSVTGASFEENNNMVTQTGYACASSSPWSMYDANLQVERYGDMDFSFLHMLDNHSDGFTSDQLGHYSGLYKMHSGELFYPTSPQPYQDINDQVIGNINEDFDDNAFSHQSFLWNF 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00423 261 FunFam Ethylene-responsive transcription factor 2 29 87 - -
Bach12g00423 261 SUPERFAMILY DNA-binding domain 29 87 IPR016177 GO:0003677
Bach12g00423 261 Pfam AP2 domain 29 78 IPR001471 GO:0003700|GO:0006355
Bach12g00423 261 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Bach12g00423 261 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Bach12g00423 261 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 24 157 - -
Bach12g00423 261 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Bach12g00423 261 Gene3D AP2/ERF domain 28 87 IPR036955 GO:0003700|GO:0006355
Bach12g00423 261 CDD AP2 29 88 IPR001471 GO:0003700|GO:0006355
Bach12g00423 261 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00423 Bach-Chr12 2843629 2844414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00423 29 134 AP2-EREBP Transcription Factor Family AT1G74930 66.981 3.95e-43 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach12g00423 AP2 8.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00423 - - gmx:100808434 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00423 12 2843629 2844414 Bach12g00423 12 2843629 2844414 ECH