Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00420 ATGGCTGGTGGTAGAGTTGAAGTGATAAATAGTAAAGGATGCTCTAGGCTGATTTTTCCTTCGTTTCCTTCATTTAGAGGTCTTCGACCATTGGAGCCAATGTCTCCTGTTTCGTTCTCTGTCAGTTCCGGACTGGTGGAAGTGCGATCAAGTGCACCTTTTGCTGGTCTTGTTATATGCGTTACTGGTCTATCTAAAGAAGCAAGGAAACAGGTAATGGAAGCTACGGAGAGATTAGGCGGACAGTATAGTCCCAATTTGCATCCTCAATGTACCCATTTGGTCGTTCAGATATCCTTTCTTCTATCTGAAATGATATGA 321 0.4299 MAGGRVEVINSKGCSRLIFPSFPSFRGLRPLEPMSPVSFSVSSGLVEVRSSAPFAGLVICVTGLSKEARKQVMEATERLGGQYSPNLHPQCTHLVVQISFLLSEMI 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00420 106 Gene3D BRCT domain 52 101 IPR036420 -
Bach12g00420 106 Pfam twin BRCT domain 57 97 IPR001357 -
Bach12g00420 106 CDD BRCT_TopBP1_rpt2_like 53 97 - -
Bach12g00420 106 PANTHER BRCT DOMAIN DNA REPAIR PROTEIN-RELATED 4 97 - -
Bach12g00420 106 ProSiteProfiles BRCT domain profile. 49 106 IPR001357 -
Bach12g00420 106 SUPERFAMILY BRCT domain 51 96 IPR036420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00420 Bach-Chr12 2823962 2825460 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00420 53 97 Core DNA Replication Machinery Family AT1G77320 42.222 8.81e-07 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00420 - - qsa:O6P43_015824 151.754