Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00401 ATGGCTTCTAATTTATTATTGATCAATAACCTTTTCATTCTCTCACTCTTAATTATGCTCTTCAGTAATATTCTGGCAAGTCGACCTTATTCCTCTGCTCTCATTACAAAATCGCAGTACTTGAAGGTTCCAATGCAAGAGTTTGAGAATTCAGTGAATTCAGCAATGAATCATGCTCAAACTGTTGCCTCTGTGATGTTCAACGTGGTCAACACAAACTATGATTTTCAACTGTCTAATGCTACTGCTGACTGCCTTGAATTGCTAGATTCAACCCAGGAGCTTTTGGAGTGCGCTCTTTCTGAATTGCAGAATCCTGGAGGTAAAACAGGAGATGTAACATCAGATGTCCAAAGTTGGCTAAGTGGTGCCCTAACCAACCAAGCAACCTGCATGGACGAATTACTGGAAACCAATCACATCTCAAAGCACACAGTTTCACCCTCCCTGCACCAACTCGAAGCCATCCTACAAGACCTTTTAGCCATGGTCCAACCCCAACACCCACCTCTACCAAGCACCAACTCAGGAAATCCTTCTTGGATTGAACCCCAACTATTAAACGTCATCCAAACCAATGATATCAAACCCAACGTCACAGTAGCTGCTGATGGGTCTGGAAACTTCACCAACATCACCCAAGCCATCAAAACGGCACCAAACAAGAGCCAATACCGCTATGTCATTTACATAAAGAAGGGCATATATAATGAATACATAGAAATCAAAAAGAACCTCTGGAACATTTACTTGGTCGGAGACGGCATCAACCAAACCATCATCACAGGGAACCACTCCAACAAAACTGGCTGGTCCACCTTCCATTCTGCAACATTTGCTGTTAGAGGTCAAAAATTTGTAGGAATTAACATTACGTTCGAGAACACGGCAGGTGAAGAAGGGAACCAAGCAGTGGCCTTACGTTCAGATTCTTGCAATTCCATATTTTATCAGTGTGAGATGAGAGGTTACCAGGATACACTTTACCCCCACAGGTCCGTCCAGTTTTATAAGGACTGCAAAATCAGTGGTACCGTAGACTTTATTTTTGGCGACGGCACTGTCGTTTTCCAAGGATGCGAGATATTAGCCAGGCAGCGTCGTTTAAGTGTGGATGGATACAACACCATTACCTCTCAAGGTCGTAAATATCCGAATAATAAAAGCGGGTTCTCTTTCCATTTGTGCAATATCACGGGGGACTCGGATCTTTTATATTCTCAGAACAGAACCCGGACCTATTTGGGCCGTCCATGGAAACCTCTTGCCCGAGTGGTGATCCTGGAGTCCAATGTAAGCGACGTCGTTCACCCAGATGGATGGGCCGAAACGGACCCCGCCTATGACTCTACTGTGTTCTTTGGAGAGTACAAAAATAACGGGCTTGGTTCGGGTGTGAATGGGCGGGTCAATTGGCCCGGTGTTCATGTTAATATTGACAAAGACACTGCTCACAACTTCACAGTCTCGGTCTTTATTAAAGGATCCACCTTTATACCTTCAACTGACATCCCTTACATTCCTGGGTTACAATCCTAA 1539 0.4418 MASNLLLINNLFILSLLIMLFSNILASRPYSSALITKSQYLKVPMQEFENSVNSAMNHAQTVASVMFNVVNTNYDFQLSNATADCLELLDSTQELLECALSELQNPGGKTGDVTSDVQSWLSGALTNQATCMDELLETNHISKHTVSPSLHQLEAILQDLLAMVQPQHPPLPSTNSGNPSWIEPQLLNVIQTNDIKPNVTVAADGSGNFTNITQAIKTAPNKSQYRYVIYIKKGIYNEYIEIKKNLWNIYLVGDGINQTIITGNHSNKTGWSTFHSATFAVRGQKFVGINITFENTAGEEGNQAVALRSDSCNSIFYQCEMRGYQDTLYPHRSVQFYKDCKISGTVDFIFGDGTVVFQGCEILARQRRLSVDGYNTITSQGRKYPNNKSGFSFHLCNITGDSDLLYSQNRTRTYLGRPWKPLARVVILESNVSDVVHPDGWAETDPAYDSTVFFGEYKNNGLGSGVNGRVNWPGVHVNIDKDTAHNFTVSVFIKGSTFIPSTDIPYIPGLQS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00401 512 CDD PMEI-like_4 16 167 - -
Bach12g00401 512 Pfam Plant invertase/pectin methylesterase inhibitor 50 145 IPR006501 GO:0004857
Bach12g00401 512 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 163 IPR035513 -
Bach12g00401 512 Gene3D Invertase/pectin methylesterase inhibitor family protein 22 166 IPR035513 -
Bach12g00401 512 SUPERFAMILY Pectin lyase-like 196 509 IPR011050 -
Bach12g00401 512 Pfam Pectinesterase 198 495 IPR000070 GO:0030599|GO:0042545
Bach12g00401 512 Gene3D - 192 510 IPR012334 -
Bach12g00401 512 ProSitePatterns Pectinesterase signature 1. 223 242 IPR018040 -
Bach12g00401 512 SMART PMEI_2 30 163 IPR006501 GO:0004857
Bach12g00401 512 NCBIfam pectinesterase inhibitor domain 51 147 IPR006501 GO:0004857
Bach12g00401 512 FunFam Pectinesterase 4 195 510 - -
Bach12g00401 512 PANTHER PECTINESTERASE 37 500 - -
Bach12g00401 512 ProSitePatterns Pectinesterase signature 2. 342 351 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00401 Bach-Chr12 2678164 2680391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00401 1 512 Carbohydrate Esterase AT3G43270 43.208 6.65e-148 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00401 K01051 - qsa:O6P43_015843 475.322