Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00399 AAGTCTTGGGTGTGAAGTAGTTCAATTATTGCTGATTGTTGAAGTTGTGAATCCCTCTCAACGGCGTAGAGGCTAGAGAGGAGATAGAAAGGAGGAAATGGGTTGGGGTCACTTGGGAAGAAATGGCCATTCGGACTCGGGTCCCGCCACGAGCACCGCCACCGACGAATCGCCCCCCCGGCGGTTTCCGGTTGCAGCTCAGCCAGAGATCATGAGAGCAGCTGAGAAAGACGACCAGTATGCCTCTTATGTCTATGAAGCATGTCGCGACGCTTTTCGCCACCTCTTTGGTACAAGAGTTGCGGTTGCTTACCAAAGTGAGACAAAACTTCTGGGACAGATGCTTTACTATGTGCTGACAACAGGTTCAGGACAACAGACACTAGGAGAGGAATACTGTGACATTACTCAGGTTGCAGGTCCATATGGACTTCCTCCTACCCCTGCAAGGCGGGCTCTTTTTATTTTATACCAGACAGCCGTTCCATATATTGCAGAACGTATTAGTTCTAGAATTGCTTCCCGAGGCATTGCCCTTACTGATTCACAATCTGATGAGATCTATAGCGAAAACTCCCCGAGAAGCATTCATATGCAAACTTCTGCAGCGAGTGAACTTCCGTCTTCCACATCTGGGGCATCTGTTACAACACTGGGAAGGTTGAAGGAGAAACTGAGTAGATTATGGTTGCATGGAGTTGAGAGATGGCCTGCGATGCTCCCTATGGTTCGTGATTTGTTGCAATTGGTTCTTCGCACTAATCTCATGTTCTTCTACTTCGAAGGCCTCTATTATCATATATCAAAACGTGCTTCTGGCATTCGTTATTTGTTCATTGGAAAAGCATCAAATCAAAGACCCAGATACCAAATACTGGGAGTATTTCTTCTGATTCAACTTTGTATAATTGCTGCTGAAGGACTGCGTCGAAGTAATTTATCTTCATTTGCGAGTTCAGTTCATCAGGCATCCATTGGGGCCCACCAGACACCAGCAGGACGAGGTTTGCCTGTTTTAAATGAAGAAGGCACTCTGGCATCTGCAGATACTGACAAAGGAAGTTGGATATCTGACTCTTCGCCTTCTGAGTCCCAAACAAATAGTGGAATCAGCAAATGTACACTCTGCTTGAGTAATCGTCAACACCCAACAGCCACATCCTGTGGCCATGTATTCTGCTGGAACTGTATCACAGAATGGTGCAACGAAAAGCCAGAATGCCCTCTATGCCGCACGCCCATAACACACTCAAGTTTAGTTTGTCTGTATCATTCAGACTTCTAAAATCTGCGTCTCTTCAGATTCAGTCCCCTGTATACATAAGAAGCAACAGTTCCTTGTATTGAATCTTCCAAGCAATATTATTATCCGAGGATAATATGGTTGAATGATGAATCCTTCATTGATCGGCAATCATGGTGGTGGCTACTTTAACTAGTAATACAGATTCCTTCTTCAGTATGGTTCCGATATACGAGATGGATATCACAAACCCTGTAACTTGTAGTTTCCCCGTGTTCATACATTCTCTCTTTTTTCTTCAGCCTTGTTTTTTTCGCAAGCGCTGTCGGACTTGATTAATTGCCCTTTGTTCTTCAAAACGAATGGTTTCATTTTTGTAATTTT 1627 0.4444 MGWGHLGRNGHSDSGPATSTATDESPPRRFPVAAQPEIMRAAEKDDQYASYVYEACRDAFRHLFGTRVAVAYQSETKLLGQMLYYVLTTGSGQQTLGEEYCDITQVAGPYGLPPTPARRALFILYQTAVPYIAERISSRIASRGIALTDSQSDEIYSENSPRSIHMQTSAASELPSSTSGASVTTLGRLKEKLSRLWLHGVERWPAMLPMVRDLLQLVLRTNLMFFYFEGLYYHISKRASGIRYLFIGKASNQRPRYQILGVFLLIQLCIIAAEGLRRSNLSSFASSVHQASIGAHQTPAGRGLPVLNEEGTLASADTDKGSWISDSSPSESQTNSGISKCTLCLSNRQHPTATSCGHVFCWNCITEWCNEKPECPLCRTPITHSSLVCLYHSDF 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00399 395 ProSitePatterns Zinc finger RING-type signature. 356 365 IPR017907 -
Bach12g00399 395 MobiDBLite consensus disorder prediction 318 336 - -
Bach12g00399 395 SMART ring_2 341 378 IPR001841 -
Bach12g00399 395 Pfam Zinc finger, C3HC4 type (RING finger) 339 384 - -
Bach12g00399 395 SUPERFAMILY RING/U-box 340 384 - -
Bach12g00399 395 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 315 392 IPR013083 -
Bach12g00399 395 MobiDBLite consensus disorder prediction 317 336 - -
Bach12g00399 395 FunFam Peroxisome biogenesis factor 10 316 392 - -
Bach12g00399 395 PANTHER PEROXISOME ASSEMBLY PROTEIN 10 31 393 IPR025654 GO:0005778|GO:0007031|GO:0008270|GO:0016558
Bach12g00399 395 Pfam Pex2 / Pex12 amino terminal region 45 278 IPR006845 -
Bach12g00399 395 MobiDBLite consensus disorder prediction 1 30 - -
Bach12g00399 395 CDD RING-HC_PEX10 339 390 - -
Bach12g00399 395 ProSiteProfiles Zinc finger RING-type profile. 341 379 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00399 Bach-Chr12 2665181 2669522 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00399 327 391 C3H Transcription Factor Family AT4G27470 38.158 9.36e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00399 K13346 - qsa:O6P43_015847 655.21