Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00396 ATGGACTCTAAGAGTCAGACTCTGAAAGGCGGCGAAGTTAGCATGTCGGAGAAGAAAACAACTAATGGTGGTGAAGTGGTGGTGGTGATTTCTGGCCAGCAGAGCCCAAATGCTAATATTGGAGAGAGCCAAGACTCCAAAGGGATTTCTTCCAAAGGAGCTGAAGCTTTGCCCCCGAAGCAGACCAGAGTGAATTCGCCTCAAAACATGTCTGCCGAGTTCACTATTGGCCATGGGCCATCAAAGTCGCCACCTTTAAACAGTGCTTCCCCTGAGATCTCAAGGTTCAGTTCCAGCCCAAATAAACCCCCCAAAGTCCCTGCTCCGAACGGAAACCTTGTCCGAAGAAAGTCACTTACGAGATCGGTTTATTCCAAACCCAAATCAAGGTTTGGCGATCAATCTTATCCTGTTGATGCAACATTGTTTGAAGAGAACAACGCTTCAACCCTGCAAGAACAGTTGGCCGTTAATTCGCCTTATAGGAACTCGTTCAGTAAATCATCTCCTAATAACAAACCCGCCACTGTTGATAGGACGATTCCCATCATCACTCCTAAGACACCGTTGATGGCATCTCCGGGGCCACCTGGAGAGGATGAGGATGAAATCATTTTTAAGAAAGTTGAATTGAGCAAAGGAAAGCGTAAGAGATTGACGACTAGGGTTCTTATCGAATGGTTTTTATTAGTGTGTATTGCAGGGTGCCTGGTGGCTAGCTTGACAGTTGACAAACTGAGAAATACTATGATATGGGGTTCGGATTTTTGGAAGTGGTGTGTCCTTGTGATGGTTATCTTTTCTGGCATGTTAGTTACGAAGTGGTTCATGCGCATTATTGTTTTCTTGATTGAAATTAACTTCTTGCTGAGGAAAAAGGTGCTGTATTTTGTTCATGGACTGAAGAAAGTTGTTCAGGTCTTCATTTGGTTGGCCTTGGTTCTTCTCACATGGGTTCTGTTAATCAATCGTGGGGTTCAGCGATCTAAAATCGCAGAAATTTTTTTGGATGGCGTGACATGGACTCTTGTTTCTCTTCTCATTGGAGCATTCTTGTGGTTGTTAAAGACATTGTTGCTAAAGATATTAGCATCAAATTTCCATGTGAAATCTTTCTTTGATAGAATTCAAGAATCAATATTCCACCAGTATATTTTGCAGACTCTATCGGGGCCTCCACTTATAGAGGAGGCTGAGAAGGTTGGGAGATCAGCAAGTATTGGTCAATTTAGTTTCAGGGGTACTAAAGGTAAAGGAAGGGCGAAGAAAGAGGTGATTGACATGGCGAAGCTTCACAAGATGAAACGAGAGAAAGTTTCTGCTTGGACCATGAAGATGTTGGTTGACGCAGTTTCCAATTCAGGGCTATCAACAATCTCTAATGTGTTAGATGAAAGTTTTGATGATGGAGCTGAACAAACTGATAAAGAGATTACAAATGAGATGGAAGCAACTGCTGCTGCCTATCACATTTTCAGGAATGTTGCTGGCCCTGGTTGCTCGTACATTGATGAGGAAGACCTCATGAGGTTCATGATTAAGGAAGAAGTGGATCTGGTGTTTCCCCTTTTTGAGGGGTCAGAGACTGGACGAATTGACAGAAAGGCTTTAACAAGCTGGGTGGTGAAGGCCTATCATGAGCGCAGAGCATTGGCACACGCCTTAACCGACACCAAAACTGCTGTAAAACAATTAAACAAGCTTGTGACTGTGGTCCTGGTAGTTGTGACCATAATAGTGTGGCTTCTGCTGATGGAGATTGCAACAACAAAAGTGCTTGTAGTCCTCGTATCGCAGCTGGCACTCATAGCTTTTATGTTTGGAAACACATGCAAAAACATATTTGAAGCTATCATCTTCGTATTTGTGATGCATCCATTTGATGTTGGTGATCGATGTGTTGTTGATGGTGTTCAGCTGTTGGTTGAAGAAATGAATATATTGACAACGGTCTTCTTGAAGCTTGATAACGAGAAGGTGTACTATCCAAACTCAGTTCTGGCCACAAAACCCATTAGCAATTACTACAGAAGCCCGGATATGGGTGACAATGTAGAGTTCTCGATTGACTTTATGACACCAGTGGAGAAGATTGGGGCACTGAAAGAAAAAATAAAGAGGTACTTGGAGAAAAATCCACAGCACTGGCATCCGAAGCACATGGTGGTGGTGAAGGAGATTGAAAATGTGAATAAGATTAAGATGGCTGTGTTTTTTACCCACACAATGAACTTTCAAGATTACGGAGAGAAGACTAATCGGAGAACTGAACTGGTAATTGAACTAAAGAAAATATTCGAAGAGCTCAATATCAGATACAACCTTCTTCCTCAAGCAGTTCATCTTCACCATATTGAATCAGATACGAGTGAACTGCACAGATGA 2385 0.426 MDSKSQTLKGGEVSMSEKKTTNGGEVVVVISGQQSPNANIGESQDSKGISSKGAEALPPKQTRVNSPQNMSAEFTIGHGPSKSPPLNSASPEISRFSSSPNKPPKVPAPNGNLVRRKSLTRSVYSKPKSRFGDQSYPVDATLFEENNASTLQEQLAVNSPYRNSFSKSSPNNKPATVDRTIPIITPKTPLMASPGPPGEDEDEIIFKKVELSKGKRKRLTTRVLIEWFLLVCIAGCLVASLTVDKLRNTMIWGSDFWKWCVLVMVIFSGMLVTKWFMRIIVFLIEINFLLRKKVLYFVHGLKKVVQVFIWLALVLLTWVLLINRGVQRSKIAEIFLDGVTWTLVSLLIGAFLWLLKTLLLKILASNFHVKSFFDRIQESIFHQYILQTLSGPPLIEEAEKVGRSASIGQFSFRGTKGKGRAKKEVIDMAKLHKMKREKVSAWTMKMLVDAVSNSGLSTISNVLDESFDDGAEQTDKEITNEMEATAAAYHIFRNVAGPGCSYIDEEDLMRFMIKEEVDLVFPLFEGSETGRIDRKALTSWVVKAYHERRALAHALTDTKTAVKQLNKLVTVVLVVVTIIVWLLLMEIATTKVLVVLVSQLALIAFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVVDGVQLLVEEMNILTTVFLKLDNEKVYYPNSVLATKPISNYYRSPDMGDNVEFSIDFMTPVEKIGALKEKIKRYLEKNPQHWHPKHMVVVKEIENVNKIKMAVFFTHTMNFQDYGEKTNRRTELVIELKKIFEELNIRYNLLPQAVHLHHIESDTSELHR 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00396 794 SUPERFAMILY Sm-like ribonucleoproteins 616 675 IPR010920 -
Bach12g00396 794 FunFam Predicted mechanosensitive ion channel 626 675 - -
Bach12g00396 794 PIRSF Memb_At2g17000 29 791 IPR016688 -
Bach12g00396 794 Pfam Mechanosensitive ion channel 566 772 IPR006685 GO:0016020|GO:0055085
Bach12g00396 794 MobiDBLite consensus disorder prediction 1 50 - -
Bach12g00396 794 MobiDBLite consensus disorder prediction 115 129 - -
Bach12g00396 794 MobiDBLite consensus disorder prediction 61 101 - -
Bach12g00396 794 Gene3D - 626 675 IPR023408 -
Bach12g00396 794 MobiDBLite consensus disorder prediction 1 131 - -
Bach12g00396 794 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 8 786 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00396 Bach-Chr12 2651571 2654348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00396 57 782 Mechanosensitive Ion Channel Family AT5G12080 61.918 0.0 896
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00396 K22048 - qsa:O6P43_019135 1162.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00396 12 2651571 2654348 Bach12g00396 12 2651571 2654348 ECH