Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00393 ATGGAGGGAGGTGCTCCGTACAATCCTCGTACAGTCGAGGAGGTTTTCAGGGACTTCAAGGGTCGAAGAGCTGGCATGATTAAGGCTCTCACCACTGATGTTGAAGAGTTCTATCAGCAGTGTGATCCGGAGAAGGAAAATCTTTGCCTTTATGGATTTCCTAGTGAGCAGTGGGAAGTCAATCTGCCTGCTGAGGAGGTGCCTCCAGAGCTTCCTGAGCCTGCATTGGGTATTAACTTTGCTAGAGATGGCATGCAAGAAAAGGACTGGCTATCATTGGTTGCTGTCCACAGTGATGCATGGTTACTTGCTGTGGCTTTCTATTTTGGTTCTAGGTTTGGATTTGATAAGGCTGATAGGAAACGACTGTTTAATATGATAAATGATCTTCCGACAATATTTGAGGTTGTTACAGGGTTGGCCAAGAAACAAGGACAAGGAAAGGAAAAGTCATCAGTTTCTAATCATAGCAGTAACAAATCCAAATCTAAGCGAGGATCTGAGTCCCAGGGAAAGCATTCAAAAGCAATGCAATCAAAGGATGAGGATGAGGAGGGTTTGGAAGAGGAAGATGAAGATGAGCATGGGGAGACACTTTGTGGGGCATGTGGAGAGAACTATGCAGCTGATGAGTTCTGGATTTGCTGTGACATCTGTGAGAAGTGGTTCCATGGGAAGTGTGTGAAGATTACTCCTGCCAAGGCTGAGCATATCAAGCAGTATAAATGTCCATCGTGCAGCAACAAGAGAGCTCGACCTTGA 762 0.4554 MEGGAPYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGSRFGFDKADRKRLFNMINDLPTIFEVVTGLAKKQGQGKEKSSVSNHSSNKSKSKRGSESQGKHSKAMQSKDEDEEGLEEEDEDEHGETLCGACGENYAADEFWICCDICEKWFHGKCVKITPAKAEHIKQYKCPSCSNKRARP 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00393 253 SMART PHD_3 199 247 IPR001965 -
Bach12g00393 253 MobiDBLite consensus disorder prediction 161 182 - -
Bach12g00393 253 MobiDBLite consensus disorder prediction 145 193 - -
Bach12g00393 253 Pfam PHD-finger 200 249 IPR019787 -
Bach12g00393 253 PANTHER CPG BINDING PROTEIN 8 252 IPR045104 GO:0006355|GO:0042393
Bach12g00393 253 ProSiteProfiles Zinc finger PHD-type profile. 197 249 IPR019787 -
Bach12g00393 253 CDD PHD_AL_plant 199 249 IPR044104 -
Bach12g00393 253 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 190 248 IPR013083 -
Bach12g00393 253 ProSitePatterns Zinc finger PHD-type signature. 200 246 IPR019786 -
Bach12g00393 253 SUPERFAMILY FYVE/PHD zinc finger 189 250 IPR011011 -
Bach12g00393 253 MobiDBLite consensus disorder prediction 145 160 - -
Bach12g00393 253 FunFam PHD finger alfin-like protein 192 248 - -
Bach12g00393 253 Pfam Alfin 11 139 IPR021998 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00393 Bach-Chr12 2621003 2623986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00393 1 252 Alfin-like Transcription Factor Family AT3G42790 77.559 2.41e-127 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Bach12g00393 Alfin 1.3e-69 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00393 K26274 - pop:7476667 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00393 12 2621003 2623986 Bach12g00393 12 2621003 2623986 ECH
Bach12g00393 12 2621003 2623986 Bach14g00256 14 1751224 1754211 ECH