Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00391 ATGAGTTTAAGGGCAGCCGAAGATGATTCGGCTTCAGAGATTCATATCCCAGCAGAGATAGATTGGCATATGCTTGATAAGTCCAAATTCTTCTTGCTAGGCGCCGCTTTATTTTCCGGTGTATCAGCTGCGCTATATCCAATTGTTGTGTTGAAGACCCGTCAACAGGTTTGTTCAACACAGATTTCTTGCTTCAAGATGTCTTTTGCCATTATGCGCTACGAAGGTTTCAGAGGGTTTTACAAAGGTTTTGGCACTTCCTTGATGGGAACAATCCCTGCTCGAGCACTTTACATGGGTGCCCTCGAAGTTACTAAGAGTAGTGTTGGCACTGCCACTGTTGGACTGGGGTTTTCAGATACCACAGCCGCAGCCATAGCTAACGGTGCTGCTGGGGTGAGTTCCGCCATGGCTGCCCAATTTGTTTGGACCCCAATCGATGTTGTGAGCCAGAGACTCATGGTTCAAGGCTGCAGTAGCAGCAGTGGAAGCAAGAACATACTGTCCAGTGTTCATTCTGGTGGGAATTACAGGAACGGTCTTGATGCGTTCAGAAAAATTGTTTATGCAGATGGACTGAGAGGATTGTACAGGGGATTTGGGATTTCAATATTGACTTATGCACCATCCAATGCGGTTTGGTGGACTTCGTATTCTATGGTTCACAGACTCATCTGGGGTGCTTTTGGTTGCCACATGGGTAAGAGGGATGAGAGTAATTTAGCCAATAGGTATAGTTTTAGGCCTGATTCCAGGGCAATGGTAGCTGTACAAGGGTTGAGTGCAGTAATGGCCAGTGGAGTTTCGGCAATTATAACCATGCCACTTGACACAATCAAGACAAGGTTGCAGGTCTTGGATGCAGAGGAAAATGGACGAAGAAGACCATTGACTGTTATGCAGACTGTAAGGAATTTGGTGAAGGAAGGTGGCCTCATTGCTTGTTACAGAGGATTGGGGCCAAGGTGGGCTTCAATGTCCATGTCTGCAACAATTATGATTACCAGCTATGAGTTTTTGAAACGCATGTCTACAAAAAGGCAAGAGAAATTAACTGCATCTGCATGA 1068 0.4579 MSLRAAEDDSASEIHIPAEIDWHMLDKSKFFLLGAALFSGVSAALYPIVVLKTRQQVCSTQISCFKMSFAIMRYEGFRGFYKGFGTSLMGTIPARALYMGALEVTKSSVGTATVGLGFSDTTAAAIANGAAGVSSAMAAQFVWTPIDVVSQRLMVQGCSSSSGSKNILSSVHSGGNYRNGLDAFRKIVYADGLRGLYRGFGISILTYAPSNAVWWTSYSMVHRLIWGAFGCHMGKRDESNLANRYSFRPDSRAMVAVQGLSAVMASGVSAIITMPLDTIKTRLQVLDAEENGRRRPLTVMQTVRNLVKEGGLIACYRGLGPRWASMSMSATIMITSYEFLKRMSTKRQEKLTASA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00391 355 ProSiteProfiles Solute carrier (Solcar) repeat profile. 253 343 IPR018108 -
Bach12g00391 355 Gene3D Mitochondrial carrier domain 29 354 IPR023395 -
Bach12g00391 355 Pfam Mitochondrial carrier protein 257 346 IPR018108 -
Bach12g00391 355 Pfam Mitochondrial carrier protein 35 108 IPR018108 -
Bach12g00391 355 Pfam Mitochondrial carrier protein 126 226 IPR018108 -
Bach12g00391 355 SUPERFAMILY Mitochondrial carrier 23 340 IPR023395 -
Bach12g00391 355 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 108 IPR018108 -
Bach12g00391 355 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 10 349 - -
Bach12g00391 355 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 224 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00391 Bach-Chr12 2611318 2612385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00391 1 349 Chloroplast and Mitochondria Gene Families AT1G72820 66.761 3.04e-167 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00391 K15121 - qsa:O6P43_015862 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00391 12 2611318 2612385 Bach12g00391 12 2611318 2612385 ECH