Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00389 ATGATCCTTTCTTTTCACAGTAATGTATGGTGTACCAAAATGACTGATAATAATCCTAAATCAGATTCGCCGGACAGCGATTTCACCAACTTGTCTGATTACTTGAAGTTTGATGAATTTCTAGAGGAAGATCCGTCTTCTTTCTTTTCTGGGCATACACCACGCCAGGATAATCAAGCCAATGAATTTAGTGACCTTGGAGCAAGTGGCAGCCACTCTCAGGGGTCTTTTGGTTCTACCAACTTTAGCAGTGGAAGTGAGAAGAGAGAATTTAAAGAGAGAGTTGCATTCAAAACAAAGTCAGACGTTGAAATACTGGATGATGGGTACAAGTGGAGGAAGTATGGAAAGAAGATGGTGAAGAACAGCCCCAATCCAAGGAATTATTATAAGTGTTCTGTGGACGGTTGTATCGTCAAAAAGAGAGTCGAAAGAGACAGGGATGACCCAAGATACGTAATAACAACCTACGAAGGTGTCCACACCCACCCAAGTTCTTAGTTGCCCAAAACTTAGGAGGTAGTCTTGGTGGGTGTATCGGCTATAGCCAATATGAGTTCTTCCTAGCTAGCTAATTTTGCATCTATACTTAGTGTTACAATGCATTCAAACATTGTGAAGGTAGTAGCTGCATGCCTATGAAGATCGAATAGCTTCTACTACTGTCCACGACAGAAGTT 680 0.4147 MILSFHSNVWCTKMTDNNPKSDSPDSDFTNLSDYLKFDEFLEEDPSSFFSGHTPRQDNQANEFSDLGASGSHSQGSFGSTNFSSGSEKREFKERVAFKTKSDVEILDDGYKWRKYGKKMVKNSPNPRNYYKCSVDGCIVKKRVERDRDDPRYVITTYEGVHTHPSS 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00389 166 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 15 165 IPR044810 GO:0003700
Bach12g00389 166 SMART WRKY_cls 106 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach12g00389 166 Gene3D WRKY domain 93 159 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach12g00389 166 MobiDBLite consensus disorder prediction 49 85 - -
Bach12g00389 166 FunFam WRKY transcription factor 57 92 166 - -
Bach12g00389 166 ProSiteProfiles WRKY domain profile. 101 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach12g00389 166 Pfam WRKY DNA -binding domain 107 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach12g00389 166 SUPERFAMILY WRKY DNA-binding domain 99 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach12g00389 166 MobiDBLite consensus disorder prediction 45 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00389 Bach-Chr12 2600822 2601811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00389 94 165 WRKY Transcription Factor Family AT5G26170 84.722 3.01e-42 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bach12g00389 WRKY 4.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00389 - - gmx:100808823 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00389 12 2600822 2601811 Bach12g00389 12 2600822 2601811 ECH