Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00386 ATGGAGGATCTCGAGGAGGAAGAGAACGGAGAACAGGAGGTGTTAGGTTCTAGCTTGACCATGGAGAAGGTGGCAGCTGCTAAGAAGTACATAGAGAATCACTATAGGGACCAGATGAAGAATATCCAAGAGCGCAAGGAGAGACGTTGGATTCTAGAAAGGAAATTGGCTTCTTCAGATGTGCCAAATGAGGAACGAATCAACCTCATCAAAGATTTAGAGCGAAAGGAAACAGAATTTATGCGACTGAAAAGGCACAAGATATGTGTTGATGATTTTGAGCTTTTGACTATCATTGGAAGGGGAGCCTTTGGGGAGGTTAGACTGTGCCGGGAGAAGAAATCAGGAAACATTTATGCTATGAAAAAACTGAAGAAATCTGAAATGCTTAAGAGAGGCCAGGTGGAACATGTTAGAGCTGAGAGGAACTTGCTGGCCGAAGTTGCTAGTCATTGCATAGTGAAACTTTACTATTCATTCCAAGATGCTGAGTACTTGTATTTAATTATGGAATATCTTCCTGGTGGTGACATGATGACTCTGCTGATGAGGGAAGATACCTTAACTGAAAGTGTTGCTCGATTTTACATTGCTCAGAGTGTTCTGGCCATTGAGTCTATTCATAAGCATAATTACATTCACAGAGATATTAAACCAGATAATCTACTTCTGGACAAAAACGGCCACATGAAGCTCTCAGATTTTGGCCTCTGTAAGCCTCTTGATTGTACTACTCTGTCTACACTGCATGAAAATCAGACCATCCATGATGAAAATTTGGCAGAGCCAATGGAGATTGATGGATGTTTTCCTGATGCGGACAATCAGAGCAGCTGGAGAAGCCCACGTGAACAACTTCAGCACTGGCAGATGAACAGAAGGAAGTTGGCATTTTCAACAGTGGGAACACCAGATTACATTGCTCCTGAAGTACTGCTGAAAAAAGGATATGGAATGGAATGTGATTGGTGGTCACTGGGAGCAATAATGTACGAAATGCTAGTTGGCTATCCTCCATTTTTCTCAGATGACCCAATAACCACTTGTAGAAAGATTGTTCATTGGAAAAATCATTTAAAATTTCCAGAAGATTCTCTGTTGTCACTTGAGGCCAAGGATCTAATTTGCAGATTGCTGTGTGATGTTGAACATAGATTATGTACCCGAGGGGCACATGAAATCAAGGCTCATCCTTGGTTCAAGGGCGTTGAGTGGGATAAATTGTATGAAATGGAGGCAGCATATAAGCCACAAGTCAACTGGGAGCTGGATACCCAAAACTTCATGAAGTTTGACGAAGTGGAGCCAATAACAGCAGCACGAACTGGTTCAGGATCCTCAAGAAAGATGCCCCCCAAAGATCTAAACTTTGTTGGTTACACCTACAAGAACTTTGATGCTGTGAAAGGTCTTCGCCAGTCTTTGGGTGATTCTGGGCAAGATTATCCTACTAAACTGGAAGCTGAGGAAATAGGTTATCAAATGTTTGGATCATCCGGAGATCCCATGTTACCATAA 1518 0.4216 MEDLEEEENGEQEVLGSSLTMEKVAAAKKYIENHYRDQMKNIQERKERRWILERKLASSDVPNEERINLIKDLERKETEFMRLKRHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLMREDTLTESVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCTTLSTLHENQTIHDENLAEPMEIDGCFPDADNQSSWRSPREQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFFSDDPITTCRKIVHWKNHLKFPEDSLLSLEAKDLICRLLCDVEHRLCTRGAHEIKAHPWFKGVEWDKLYEMEAAYKPQVNWELDTQNFMKFDEVEPITAARTGSGSSRKMPPKDLNFVGYTYKNFDAVKGLRQSLGDSGQDYPTKLEAEEIGYQMFGSSGDPMLP 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00386 505 SMART pkinase_C_6 401 464 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bach12g00386 505 PANTHER SERINE/THREONINE-PROTEIN KINASE 14 434 - -
Bach12g00386 505 CDD STKc_NDR_like 91 463 - -
Bach12g00386 505 FunFam Non-specific serine/threonine protein kinase 299 418 - -
Bach12g00386 505 FunFam Non-specific serine/threonine protein kinase 54 176 - -
Bach12g00386 505 Gene3D Phosphorylase Kinase; domain 1 91 176 - -
Bach12g00386 505 Gene3D Phosphorylase Kinase; domain 1 419 429 - -
Bach12g00386 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Bach12g00386 505 FunFam Non-specific serine/threonine protein kinase 177 244 - -
Bach12g00386 505 CDD MobB_NDR_LATS-like 27 88 - -
Bach12g00386 505 SMART serkin_6 93 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g00386 505 Gene3D Transferase(Phosphotransferase) domain 1 295 418 - -
Bach12g00386 505 Gene3D Transferase(Phosphotransferase) domain 1 177 242 - -
Bach12g00386 505 SUPERFAMILY Protein kinase-like (PK-like) 77 448 IPR011009 -
Bach12g00386 505 Pfam Protein kinase domain 94 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g00386 505 Pfam Protein kinase domain 292 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g00386 505 ProSiteProfiles AGC-kinase C-terminal domain profile. 401 472 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bach12g00386 505 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Bach12g00386 505 ProSiteProfiles Protein kinase domain profile. 93 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g00386 505 Pfam Protein kinase C terminal domain 422 462 IPR017892 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00386 Bach-Chr12 2580073 2585815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00386 1 504 AGC Kinase Gene Family AT4G33080 80.157 0.0 834
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Bach12g00386 Pkinase 2.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00386 K08790 - gmx:100805455 905.975