Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00376 ATGGATGGAATTAGAGTGAAGGAGGAAGAGACATTCCCATGCACAGTTGGTTCATCATCTTCTTCGTCTTCAAGCTTCTCTCCGCAACCCATGGAAGGGTTGCACGAAGTGGGTCCTCCTCCATTTCTCACCAAGACCTTTGAAATGGTTGAAGACCCATCAACAGATTCAATCGTGTCATGGAGCAGAGCACGCAACAGCTTCATTGTCTGGGATTCTAGCAGGTTCACCACCGACATTCTTCCTCGCCACTTCAAGCACTGTAACTTCTCCAGCTTCATTCGACAGCTCAACACATATGGTTTCAGAAAAGTTGATCCAGATCGATGGGAATTCGCAAACGAAGGGTTTTTGGCTGGACAGAAGCACTTATTGAAGACCATCAAGAGAAGAAGAAATGTGTCACAGAGTCTACAACAGCAGAGAGGAGGAACTTGTGTTGAACTGGGTCAGTATGGCTTGGAAGGTGAACTTGACAGGTTAAGGAGAGACAGGACCGTGTTAATGGCCGACATTATAAGGTTGAGACAGCAACAGCAGAACTCAAGGGAGCAACTGATTGCCCTGGAGGGCAGATTACAAGCTACAGAGAAGAAACAGCAACAGATGCTCACTTTCCTTGCAAAGGCACTAAATAATCCATCTTTTGTGCAACAGCTTGTCCAGATAAATTCCCAGAACAGAGAATTACAGGGAACTGCAGAGATTAGGCGGAAGCGGAGGCTAACTGCGAGCACCAGCTTGGAGAATTTGCAACAAGATCCTATAACAGCGGCTGTGCCTGGTGAACCGGTGGTGGACTATTCAAGCCAAGAGCAACAAGAATTGGGAACCATGGAATCTGAGATAGAGACTTTTCTCTCTGCTGCTAATGATAATGAGCCAAGCAGTGAAATTGGAGATCCAATATCATGTTGTATGCCAGCAGCTAGTGGGAGCAATTTGGTTTCAACTAGCGACGCAATCTGGGAGGACTTACTGAACGAAGACTTAGCTGGGAATCCAGAGGATGAAGTGATACTTGGTGATTCTTCAAAAATTGATGTGCCAGTTGAGGATTTGGTTGCAAAGCCTGATGAATGGGCTGATGACTTGGAAGATCTGATGGATCAAATGGGTTATCTTGTGACTAAACCTAGTCTATAA 1146 0.4564 MDGIRVKEEETFPCTVGSSSSSSSSFSPQPMEGLHEVGPPPFLTKTFEMVEDPSTDSIVSWSRARNSFIVWDSSRFTTDILPRHFKHCNFSSFIRQLNTYGFRKVDPDRWEFANEGFLAGQKHLLKTIKRRRNVSQSLQQQRGGTCVELGQYGLEGELDRLRRDRTVLMADIIRLRQQQQNSREQLIALEGRLQATEKKQQQMLTFLAKALNNPSFVQQLVQINSQNRELQGTAEIRRKRRLTASTSLENLQQDPITAAVPGEPVVDYSSQEQQELGTMESEIETFLSAANDNEPSSEIGDPISCCMPAASGSNLVSTSDAIWEDLLNEDLAGNPEDEVILGDSSKIDVPVEDLVAKPDEWADDLEDLMDQMGYLVTKPSL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00376 381 Gene3D - 35 132 IPR036388 -
Bach12g00376 381 PRINTS Heat shock factor (HSF) domain signature 80 92 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach12g00376 381 PRINTS Heat shock factor (HSF) domain signature 93 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach12g00376 381 PRINTS Heat shock factor (HSF) domain signature 42 65 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach12g00376 381 Coils Coil 158 199 - -
Bach12g00376 381 MobiDBLite consensus disorder prediction 1 33 - -
Bach12g00376 381 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 28 270 IPR027725 -
Bach12g00376 381 MobiDBLite consensus disorder prediction 13 30 - -
Bach12g00376 381 SUPERFAMILY "Winged helix" DNA-binding domain 38 131 IPR036390 -
Bach12g00376 381 ProSitePatterns HSF-type DNA-binding domain signature. 81 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach12g00376 381 SMART hsfneu3 38 131 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bach12g00376 381 FunFam Heat shock transcription factor 1 35 132 - -
Bach12g00376 381 Pfam HSF-type DNA-binding 42 131 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00376 Bach-Chr12 2518439 2519787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00376 11 379 HSF AT2G26150 51.613 8.90e-124 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bach12g00376 HSF_DNA-bind 2e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00376 K09419 - qsu:112015615 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g02101 3 28384650 28386025 Bach12g00376 12 2518439 2519787 BWGD
Bach12g00376 12 2518439 2519787 Bach12g00376 12 2518439 2519787 ECH