Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00348 ATGATCGGAGTAGTAGAATCAAAACGATCCGTCCCCAACCTGCAAATTTCTCCTTGGGAATGGGGCCCATCGGAAACTTCGATTCCAGCTGGAGGAACACCCTCTCACTTCTCCATTAACTATAATGGCAATGCCGGTGCTGGCGATTATTCTCCTCCTCCGTCCGCTCTTCGCGGTTTTCTTTCCAATGATTTCACTCCCCTTGAGTTTGAGTTGGACGAAGAATGTGACATGCCAATTGATGCTTTCTCTAGCGACAATTTCCGCATGTTCGAGTTTAAGGTCCGCAAATGTGTACGTGGCAGGTCACATGACTGGACGGAGTGCCCGTTCGCCCACCCCGGCGAGAAGGCTCGCCGCAGGGATCCTCGGAAATTCAACTATTCTGGCACTGCTTGTCCTGAGTTCCGCAAAGGGGACTGCAGTAAAGGTGACTCGTGTGAGTTTGCTCACGGGGTCTTCGAAACCTGGCTGCACCCTGCTCGTTACAGGACTCAGCTCTGCAAAGACGAAACAAATTGTCGCCGCCGAGTTTGTTTCTTCGCTCATACTCCGGAGCAATTGCGGATCCTGACACACGGGTCGAGTGAACCATGGGACGGGTCACCGATTTGCCATACCCTTGATTCACTCCGTTGGACTAATGCTGCGACCTTAGTTTCATCACCTACTTCGGTGCTTGACTTGTCACCGCTCTCAGACTCGCCGCCCACAACGCCCTCCACCTGCCGTCAATATGGCGGCGTATCTTCCAACGCTGTTTGTAAGATAGTTTCCTCAATGCGTAATGTTCAACTCGATAACATCAACATGCCTTCCAGGGCCCGTAGTTCCCAACTTGGACCCGTATTTGGTCAGACTATCCGACCCGGGCTTTTCAGCCTTCCCTCAACTCCAACTAGAACTAGGGCAAAGATTAAATGGGGACTTGACCTCTGGGATCAGAGATGCAAAGAAGAGCCTGCAATGGAGAGAGTGCAATCCGGAAGAGACATCAGAGCCAAAATGTACGCCAAACTCAGCAAGGAGAACTCGTTTGGGCGGAACGACATAGGGATTTCAACCCCTGATTTCAGATGGATCTCCGAACTGGGGAAGTGA 1101 0.5159 MIGVVESKRSVPNLQISPWEWGPSETSIPAGGTPSHFSINYNGNAGAGDYSPPPSALRGFLSNDFTPLEFELDEECDMPIDAFSSDNFRMFEFKVRKCVRGRSHDWTECPFAHPGEKARRRDPRKFNYSGTACPEFRKGDCSKGDSCEFAHGVFETWLHPARYRTQLCKDETNCRRRVCFFAHTPEQLRILTHGSSEPWDGSPICHTLDSLRWTNAATLVSSPTSVLDLSPLSDSPPTTPSTCRQYGGVSSNAVCKIVSSMRNVQLDNINMPSRARSSQLGPVFGQTIRPGLFSLPSTPTRTRAKIKWGLDLWDQRCKEEPAMERVQSGRDIRAKMYAKLSKENSFGRNDIGISTPDFRWISELGK 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00348 366 FunFam Zinc finger CCCH domain-containing protein 66 85 153 - -
Bach12g00348 366 ProSiteProfiles Zinc finger C3H1-type profile. 127 154 IPR000571 GO:0046872
Bach12g00348 366 SMART c3hfinal6 127 153 IPR000571 GO:0046872
Bach12g00348 366 SMART c3hfinal6 162 185 IPR000571 GO:0046872
Bach12g00348 366 PANTHER UNKEMPT FAMILY MEMBER 78 365 IPR045234 -
Bach12g00348 366 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 132 152 IPR000571 GO:0046872
Bach12g00348 366 Gene3D - 127 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00348 Bach-Chr12 2305000 2306100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00348 69 245 C2H2 Transcription Factor Family AT5G12850 51.124 7.44e-53 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach12g00348 zf-CCCH 9.8e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00348 - - cave:132185767 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00348 12 2305000 2306100 Bach12g00348 12 2305000 2306100 ECH