Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00345 ATGGGTTCTGCTGATATTTGTAATCTTGGTCTAGGTCTTGGTATCGGTCCCCAAGGGAACTGCATGGAGACCGATCACCAAGAACTTAGCCTGAAGAAGAAGCAAGATCAGGATCCATTGACATGCAATACTTATCCATCTCTTACGTTAGGACCACCAGCTGATGATGAGGCATATCAATCAGCAGCAACAAAGACGGAATCTGCTGATTTTCATGCAAGAGCCTCTTCTGATAATCCAAGTGCAGTTTCTTCATTTTCAAACTCATCCAGTATTAAGACGGAGAGAGATCAGTTTGTGGGTGAAGAAGTTGATCATGAGCTTGAGGTAGACAAGTTTCCTTCAAGGATTTCATATTTAGACGAAGAAGGAAATCCCCGGAAGAAACTTAGGCTTACAAAAGAACAATCCGCACTTCTAGAGGACAGCTTCAAAGAACATTCTACTCTCAATCCGAGGGAAAAGCAAGAATTAGCTATGAAGCTGAAACTACGGGCTAGACAAGTAGAGGTGTGGTTTCAAAACAGGAGAGCCAGGACAAAGCTGAAGCAAACCGAAGTGGACTGTGAGTTACTTAAGAAGTGCTACGAAACGCTGACAGAAGAGAACAAGAGACTGCAAAAGGAAGTACAAGAGCTGAAATCAATGAAAACAGTGCCGGGACCCTATTTTATGCAGCCTCCATCAGCTACCCTCACCGTATGCCCTTCTTGTGGGAGAATTTGCACTGGTGGCACCGCAGGGAACGGCAATGGCCCTTCCGCAACGACGCCGTTCTTTATTGGCTCAAAGGTCCATAACTTCCATGAAAGTAATTATTCCTTCACGCGCCCATCTGCAGCTTGTTAA 849 0.4488 MGSADICNLGLGLGIGPQGNCMETDHQELSLKKKQDQDPLTCNTYPSLTLGPPADDEAYQSAATKTESADFHARASSDNPSAVSSFSNSSSIKTERDQFVGEEVDHELEVDKFPSRISYLDEEGNPRKKLRLTKEQSALLEDSFKEHSTLNPREKQELAMKLKLRARQVEVWFQNRRARTKLKQTEVDCELLKKCYETLTEENKRLQKEVQELKSMKTVPGPYFMQPPSATLTVCPSCGRICTGGTAGNGNGPSATTPFFIGSKVHNFHESNYSFTRPSAAC 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00345 282 SMART HOX_1 125 187 IPR001356 GO:0003677
Bach12g00345 282 ProSiteProfiles 'Homeobox' domain profile. 123 183 IPR001356 GO:0003677
Bach12g00345 282 Pfam Homeodomain 127 181 IPR001356 GO:0003677
Bach12g00345 282 Pfam Homeobox associated leucine zipper 183 217 IPR003106 GO:0006355|GO:0043565
Bach12g00345 282 Coils Coil 182 216 - -
Bach12g00345 282 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 9 249 - -
Bach12g00345 282 CDD homeodomain 126 184 IPR001356 GO:0003677
Bach12g00345 282 MobiDBLite consensus disorder prediction 43 98 - -
Bach12g00345 282 ProSitePatterns 'Homeobox' domain signature. 158 181 IPR017970 GO:0000981|GO:0006355
Bach12g00345 282 SUPERFAMILY Homeodomain-like 125 191 IPR009057 -
Bach12g00345 282 Gene3D - 120 188 - -
Bach12g00345 282 SMART halz 183 226 IPR003106 GO:0006355|GO:0043565
Bach12g00345 282 MobiDBLite consensus disorder prediction 73 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00345 Bach-Chr12 2276191 2277285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00345 1 282 Homeobox Transcription Factor Family AT2G22800 46.801 1.59e-63 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bach12g00345 Homeodomain 1.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00345 K09338 - gmx:100807072 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00345 12 2276191 2277285 Bach12g00345 12 2276191 2277285 ECH