Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00336 ATGGGTGATCATGAAAATGCGATGGGTTTTCAACTTGGAAACGATAGCATTCTGAATTGTGCGTCATCTGGTTTAACCACAAATGTTTCAGAAATGGCAATTAGTTCCGTGTCTATGGCCAAGCCTTCAGATGTAGCTAATCCTTTTCTGGGTTCTACTTGGGATCCACTTGTTTCATTGAATCAAGCTCAAACTTTCGGAGGCTCTTCAATGGTTTCTCATAATGAGTTTGCCAATTCATCTTACCCACTTCTGTTGGAAAATCAGGGAATGAGCAGCACCTCCCAACTTGTCCAATATATGTCTGACTCAAATTTCGGAGAGATGATCCCCAAGATTCCCTCATTTGAAGGTGGAAACTTCTCCGAAATGATAGGCTCCTTTGGTCAACCAGGGTGTAGTGGTATAGCTAATACGGGGTATCGACCAAGTTATAATCCAAACAAGGAGCCAGGCAACGAGAGGACTCAAACAATTGGTTCACAAACCCAGGTTGAGGACTCGACTCCTGAACAAAGAGACACAGGATCTGCAAGCAACGGAAACAGAAGAAAAAGAGGGCTTGATTGTGATTCTTCCTTCAGTCCAAATAAGAATGCCGAAGATGAAGTACGGAAAGATTCTTCTGGGAAAACCTCTGAAGTGGTGAAAGATAAAGACGATAAGAAACCAAAGATTGCGGAAAACTCAAGTGCAGATTTGCGTGGCAAGCAACCAGGAAAGCAAGCTAAAGACAACTCTCTAAGTGGAGAAGCTACCAAAGAAAATTTCATTCATGTGAGAGCTCGAAGAGGTCAAGCTACAAACAGTCACAGCCTTGCAGAAAGGGTAAGAAGAGAAAAGATCAGCGAGCGGATGAGATTGCTTCAAGAACTTGTTCCAGGATGCAACAAGATAACTGGCAAGGCAGTGATGCTTGATGAGATCATCAATTATGTGCAGTCACTCCAGCAACAAGTTGAGTTCTTGTCAATGAAACTTGCCACTGTGAACCCAGAACTGAATTTTGATGTTGAGCGGATTCTATCCAAAGATATTCTTCAATCACGCATTGGAACTAGACCAATTATTGGATATGGTGCTGGTATTAACCCTTCTCATCCTTTCCCAAGTGGAAATTTTCAAGGGCCCATGACCAGCATGCCAAGAACATCACCGCAATTCCCTCCTTTGTCTCCTCAGATTGTTTTGGAACAGGAGTTCCAAAGCTTCTATGGAATGGGATACGATTCCAGTACAGCTCTTGATAGTTTGGGACCCAATGGGCGATTGAAAACAGAGTTGTAA 1287 0.4297 MGDHENAMGFQLGNDSILNCASSGLTTNVSEMAISSVSMAKPSDVANPFLGSTWDPLVSLNQAQTFGGSSMVSHNEFANSSYPLLLENQGMSSTSQLVQYMSDSNFGEMIPKIPSFEGGNFSEMIGSFGQPGCSGIANTGYRPSYNPNKEPGNERTQTIGSQTQVEDSTPEQRDTGSASNGNRRKRGLDCDSSFSPNKNAEDEVRKDSSGKTSEVVKDKDDKKPKIAENSSADLRGKQPGKQAKDNSLSGEATKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVERILSKDILQSRIGTRPIIGYGAGINPSHPFPSGNFQGPMTSMPRTSPQFPPLSPQIVLEQEFQSFYGMGYDSSTALDSLGPNGRLKTEL 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00336 428 MobiDBLite consensus disorder prediction 178 230 - -
Bach12g00336 428 CDD bHLH_AtBPE_like 256 341 - -
Bach12g00336 428 FunFam Basic helix-loop-helix transcription factor 263 335 - -
Bach12g00336 428 SMART finulus 272 322 IPR011598 GO:0046983
Bach12g00336 428 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 266 316 IPR011598 GO:0046983
Bach12g00336 428 Gene3D - 263 337 IPR036638 GO:0046983
Bach12g00336 428 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 161 375 IPR024097 GO:0006355
Bach12g00336 428 MobiDBLite consensus disorder prediction 138 252 - -
Bach12g00336 428 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 264 334 IPR036638 GO:0046983
Bach12g00336 428 MobiDBLite consensus disorder prediction 138 177 - -
Bach12g00336 428 Pfam Helix-loop-helix DNA-binding domain 269 317 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00336 Bach-Chr12 2207159 2209102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00336 8 428 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 41.492 1.15e-76 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach12g00336 HLH 4.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00336 - - gmx:100801930 571.237