Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00322 ATGCCTCTATACCAGCCATCTAATGGGAGAGAAAACGGGGATGTAAAGCTTGATGCCGGCGGTGGCGCCGAGGTGCTTGATGTAGAAATCGTTGTTAAAGGTAGGGTTTTGGGTGGTGGAGCGGTGGTAATTGCCGGCGGCAGCATCGATGACAAATTGGATCTCAAGATGTTGATTGAGGAGCTCGAGTCAATTGATGTGCCCTCAGTGTTTATTTGCCCAATCTCCCTGGAGCCAATGCAAGAGGCGGTGACCCTTTGCACGGGACAGACCTATGACAGATCCAATATTCTGAAATGGTTCTCTCTTGGTCACAACACTTGTCCCACAACAATGCAGGAGCTTTGGGACGATTCAGTGACGCCCAACAAAACCCTGAATCAGTTAATTTATAGCTGGTTCTCTCAGAAGTACCTGGCAATGAAGAAGAAGTTCGAGGATGTGCAAGAAGGTTAA 456 0.4825 MPLYQPSNGRENGDVKLDAGGGAEVLDVEIVVKGRVLGGGAVVIAGGSIDDKLDLKMLIEELESIDVPSVFICPISLEPMQEAVTLCTGQTYDRSNILKWFSLGHNTCPTTMQELWDDSVTPNKTLNQLIYSWFSQKYLAMKKKFEDVQEG 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00322 151 Pfam U-box domain 67 137 IPR003613 GO:0004842|GO:0016567
Bach12g00322 151 CDD RING-Ubox_PUB 68 120 IPR045210 -
Bach12g00322 151 ProSiteProfiles U-box domain profile. 66 140 IPR003613 GO:0004842|GO:0016567
Bach12g00322 151 SMART Ubox_2 70 133 IPR003613 GO:0004842|GO:0016567
Bach12g00322 151 SUPERFAMILY RING/U-box 61 137 - -
Bach12g00322 151 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 149 IPR013083 -
Bach12g00322 151 PANTHER WDSAM1 PROTEIN 61 136 IPR045185 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00322 Bach-Chr12 2097850 2098305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00322 1 149 U-box Gene Family AT5G65920 62.914 2.85e-60 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00322 - - qsa:O6P43_015965 234.958