Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00306 ATGTTGTGCGCTTGCTCTGGAGAGCAGTTCAAATTTGAAGAGCCGCCACAGTCACCGGAGTCTCTTGCAACAAGGGATTTCTCTGCCAGCGGGCTTTCTTCAAGAACTGGGGATTGGGAATCAAAATTTGATGACACCCAAGTAGATGAAGTTGAATCCTCTCTAAAAGAAGCTCTCTCCTTGAACTACGAGGAAGCTAGGGCTTTGCTGGGGAGGCTTGAATACCAAAGAGGGAACTTTGATGCTGCCCTTCAAGTATTTCAGGGAATCGACATTAGGGGTTTGACCCCAAGGATGATCAGGGCTATTGCTGAGAGAACTAAGCAAAGAAAACCACGTTCCAAGGGTGATAATGTGCTTCCGAATGTGATGTCAATGCATTCAGTGAGCCTGCTTCTCGAGGCAATTTTGCTTAAATCAAAATCGTTAGAGGAACTGGGGCGATACATCGAGGCTGCTAAAGAATGCAGAATAATTCTGGATACGGTTGAATCTGCTCTACCCAATGGAATGACTGAGGTTATCGGTGGAGATTTCAAGTTGCAGGAGACGTTCCAAAAAGCGTTGGAGTTGCTCCCAAATCTATGGACTAAGGCAGGGTATCTAGATGAAGCTGTCACAGCATATAGGCGGGCTTTAGTGAAGCCATGGAATTTGGAGCCAAGAAGGTTGGCTGGTGTGCAAAAACATTTAGCCTCCACGCTACTCTACGGTGGTGTTGAAGTAAGCCTTCCCCCTCAGTTGAAGGTGTGGGGTCCAACAACACCCAAAAGTAATATTGAAGAAGCAATACTTCTGTTATTAATACTCATGAGAAAAGCAGCTGTCCAGGAAATTGAGTGGGATGCCGAAATATTGGATCATCTTACATTTGCACTTTCAATTACTGGGATGTTTGAACTGTTGGCAGATCATGTGGAGCAGATACTTCCGGGTATTTATAATCGAGTTTATAGGTGGTACTTTCTAGCTCTTTGCTGTAGTGCAGCAGGACAAGATGAAGCAGCATTGAACCTTCTGAGGAAGGCATGTGGTAGTTCTGAAGCAAAGCATACACCACATTTTCCATCCTTTCTGTTTGGTGCAAAATTGTGTTCCCAAGATCCGAACCATGCTCGAGAAGGCATTAACTTTACACGTAAAGTCATTGATATAGCCAAGCATCAAAGTGGGCATTTTTTGAGTCAAGGCCACAAATTTCTCGGTGTTTGCTATGGGGCTGCAGCTAGACTTTCTGTACTAGATTCTGAAAGGATTGTACTTCAAAGAGAGTCTTTGAATTCTCTTAACCAAGCTGCTGTAAACGGAAGTGATGATGATGCGGAAGTGATATTCAGCCTTGGTTTGGAAAATGCAATTCAAAGGAATCTGGATGCAGCTTATGACAATGCAATCATGTACTCGGAAATGACTTTCGGTGGTTCACGAAGAGGTTGGCAGTTGTTAGCGCTCATAGTTTCTGCACAGCAGCGGTTAAAAGATGCTGAAACTATAGTTGATTTCGCTTTAGATGAGGTTGACAGGATGGATCAGTTACAACTTCTAAGGTTGAAAGCGGTGCTTAAAATTGCTCAGCAGCAACCCAAGCAAGCAATAGAGACCTACAGAATCTTACTGGCATTAATTCAAGCGCACAAGGAGTTATGGCTTCAAGCTAAGAACTCTGATCAATCAAACACGTTCAGTCAAGAGGCATTAATAGAAAGGAACCTGGAAATGGAAGCCTGGCAAGATTTGGCTACCATTTATGCAGATCTTGGTTCCTGGCTTGATGCAAAAACTTGTGTGGACAAAGCTCTGTTGATAGAATCTTTTTCTCCCAGGAGTTGGCATGTTACAGGGACACTATTTGAAGCTCAATCATTATACAAGGAGGCCTTTGTTTCCTTCTCAGTTGCATTGTCAATAGAACCAGATTACATTCCAAGTATCATTTCAACTGCCGAATTGTTATTGAAGCATGGCACGCAATCGCTCCCAATTGCGAGAAGCTTTTTACTGAATGCTTTGCGATTAGAACCCACGAATCATGATGCATGGTTCAACCTTGGATTGGTTTCCAAAATGGAAGGTTCGTTGCAACAAGCAGCAGATTTCTTTCAGGCCGCGTATGAGCTAAAGCTTTCAGCTCCAGTGCAAAGATTTGTTTGA 2151 0.4347 MLCACSGEQFKFEEPPQSPESLATRDFSASGLSSRTGDWESKFDDTQVDEVESSLKEALSLNYEEARALLGRLEYQRGNFDAALQVFQGIDIRGLTPRMIRAIAERTKQRKPRSKGDNVLPNVMSMHSVSLLLEAILLKSKSLEELGRYIEAAKECRIILDTVESALPNGMTEVIGGDFKLQETFQKALELLPNLWTKAGYLDEAVTAYRRALVKPWNLEPRRLAGVQKHLASTLLYGGVEVSLPPQLKVWGPTTPKSNIEEAILLLLILMRKAAVQEIEWDAEILDHLTFALSITGMFELLADHVEQILPGIYNRVYRWYFLALCCSAAGQDEAALNLLRKACGSSEAKHTPHFPSFLFGAKLCSQDPNHAREGINFTRKVIDIAKHQSGHFLSQGHKFLGVCYGAAARLSVLDSERIVLQRESLNSLNQAAVNGSDDDAEVIFSLGLENAIQRNLDAAYDNAIMYSEMTFGGSRRGWQLLALIVSAQQRLKDAETIVDFALDEVDRMDQLQLLRLKAVLKIAQQQPKQAIETYRILLALIQAHKELWLQAKNSDQSNTFSQEALIERNLEMEAWQDLATIYADLGSWLDAKTCVDKALLIESFSPRSWHVTGTLFEAQSLYKEAFVSFSVALSIEPDYIPSIISTAELLLKHGTQSLPIARSFLLNALRLEPTNHDAWFNLGLVSKMEGSLQQAADFFQAAYELKLSAPVQRFV 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00306 716 MobiDBLite consensus disorder prediction 21 37 - -
Bach12g00306 716 Gene3D Tetratricopeptide repeat domain 655 713 IPR011990 GO:0005515
Bach12g00306 716 Gene3D Tetratricopeptide repeat domain 256 565 IPR011990 GO:0005515
Bach12g00306 716 Gene3D Tetratricopeptide repeat domain 32 239 IPR011990 GO:0005515
Bach12g00306 716 MobiDBLite consensus disorder prediction 6 40 - -
Bach12g00306 716 SUPERFAMILY TPR-like 574 707 IPR011990 GO:0005515
Bach12g00306 716 SUPERFAMILY TPR-like 432 600 IPR011990 GO:0005515
Bach12g00306 716 Gene3D Tetratricopeptide repeat domain 566 654 IPR011990 GO:0005515
Bach12g00306 716 Coils Coil 56 76 - -
Bach12g00306 716 Coils Coil 485 505 - -
Bach12g00306 716 ProSiteProfiles TPR repeat profile. 607 640 IPR019734 GO:0005515
Bach12g00306 716 ProSiteProfiles TPR repeat profile. 677 710 IPR019734 GO:0005515
Bach12g00306 716 SMART tpr_5 607 640 IPR019734 GO:0005515
Bach12g00306 716 SMART tpr_5 512 545 IPR019734 GO:0005515
Bach12g00306 716 SMART tpr_5 573 606 IPR019734 GO:0005515
Bach12g00306 716 SMART tpr_5 317 350 IPR019734 GO:0005515
Bach12g00306 716 SMART tpr_5 677 710 IPR019734 GO:0005515
Bach12g00306 716 SUPERFAMILY TPR-like 50 344 IPR011990 GO:0005515
Bach12g00306 716 PANTHER PROTEIN NPG1 1 715 IPR043376 -
Bach12g00306 716 Pfam Tetratricopeptide repeat 667 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00306 Bach-Chr12 2029828 2032717 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00306 1 716 Calmodulin-binding Proteins AT1G27460 60.779 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00306 K21843 - gmx:100799251 1137.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00306 12 2029828 2032717 Bach12g00306 12 2029828 2032717 ECH