Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00302 TTTGACTCGCGTTGTTCGGGTTCTTGACTTTCATCGATTAGCTTCACGCCGCTTCAAAGTTGTATGGTGAATCTGTTGCAACGAGATTTCAGAAGATCGAAATTTGGGGTGTTGTAGTGTGTTTCATGTGTTTGTAGGTAGGTTTCCGTCTTGATCTTTCGCTTTCCCAAAAGCGACATTCCAAATCAGATTATTGCTTTTGGCTTTCTTCTTCTGAGATTTTTAGCTGAGTGGAGAGCACAATAGCTTTTGCTTTCATTTGAGTTGCCGAGAAAGAAGAGAAAAAAAAAGGGCAGAGATGGAGACCTACCTGAATGAGAATTTTGATGTGAAACCAAAGAACTCCTCGGAGGAGGCTCTTCAGAGATGGAGAAATCTCTGTTGGCTTGTGAAGAATCGTAAAAGGAGATTTCGCTTCACTGCTAATCTCTCTAAACGATTTGAAGCTGATGCTATCAGGCGCTCCAATCAGGAGAAGTTCAGAGTTGCAGTGTTGGTCTCCCAAGCTGCACTTCAGTTTATACATGGTCTAAATTTGTTAAGTGAATATACTGTACCAGAGGAAGTTAAGGCTGCAGGTTTTGAAATTTGTGCCGATGAGTTGGGATCAATTGTTGAAGGCCGTGATGTGAAGAAGTTGAAAATTCATGGTGGGGTTGAGGGTGTTGCAGACAAGCTCACTACCTCAATCAATGACGGGATATTAACATCTGATCAACTACTTAATCAGAGAAAAGAAATTTATGGAATTAATAAATTTACTGAAAGCCCCGTCCGAGGATTTTGGATTTTCGTATGGGAAGCACTTCAAGATACGACTCTCATGATACTTGCTGTTTGTGCTTTAGTCTCACTGGTGGTTGGCATAATAATGGAAGGATGGCCGAAGGGTGCCCAGGATGGAATTGGTATTGTCGCAAGCATATTGCTCGTTGTGTTTGTCACCGCCACTAGTGATTACAGACAATCTCTACAGTTTAAGGATTTAGATAGGGAGAAGAAAAAAATTACAATTCAGGTCACTCGAAATGGATGTAGACAAAAGATTTCAATATATGATTTACTTCCTGGTGATATTGTCCATCTTAACATTGGAGATCAGGTTCCAGCTGATGGGCTTTTTGTGTCCGGCTTCTCTGTGTTGATAAATGAATCAAGCTTAACAGGAGAGAGTGAACCAGTAAATGTCAATGCTTCTAATCCTTTTCTTCTTTCAGGAACTAAAGTTCAGAATGGATCATGTAAGATGCTTGTGACCACTGTTGGAATGAGGACCCAATGGGGTAAACTGATGGCTACTCTAAGTGAAGGGGGAGATGATGAAACTCCTTTGCAGGTCAAACTTAATGGTGTGGCCACCATCATTGGGAAAATAGGCCTCTTTTTTGCTGTTGTGACTTTTGCTGTTTTGGTTCAAGGACTATTTAACCGCAAGCTGAAAGAAGGGTCTCACTGGACGTGGTCTGGTGATGATGCAATGGAGATTTTGGAATTCTTTGCCGTTGCAGTCACAATTGTTGTTGTTGCAGTTCCTGAAGGTTTGCCTTTAGCTGTAACTCTGAGCCTTGCTTTTGCTATGAAAAAGATGATGAATGATAGGGCGCTTGTCCGTCATTTGGCTGCTTGCGAGACGATGGGATCTGCCACCACTATCTGTAGTGACAAGACCGGCACACTGACTACTAACCATATGACTGTTGTCAAAGCTTGCGTATGTGGGAAGGTTAAGGAAGTAGGTAGCTCTAAGGTCTCTTCTGATTTCTTATCTGATCTTCCGGATTCTGCTGTTAGAGTTCTCCTCCAATCAATATTTAACAACACTGGAGGAGAAGTTGTCAGAAACAAGGATGATGAGATTGAAATCCTGGGAACACCAACTGAGACTGCTCTCTTGGAATTTGGTCTATCACTTGGTGGTAATTTCCAGGAAGAACGACTAGCGTCGAAAATTGTGCAAGTTGAACCCTTCAATTCTTTAAGGAAGCGCATGGGGGTTGTTCTACAACTTCCTGATGGTAGCTTCAGGGCACACTCCAAAGGCGCCTCTGAAATAATTGTAGATGCATGTGACAAAGTTATAGACTCAAATGGTGAGGTTGTTCCCCTTCATGAAGAATCCATCAATCATTTGAAAAATACAATTGAAGATTTTGCGAGTGAAGCTCTCCGTACACTTTGCCTTGCTTACATGGAGATTGGAAGCGAATACTCTGTTGAAAATCCTATTCCCATTACGGGTTACACGTGTTTAGGAATTGTAGGTATTAAAGATCCAGTTCGTCCTGGTGTCCGGGAGTCTGTTGCCATTTGTAGGTCCGCAGGTATTACTGTCAGAATGGTTACTGGAGACAACATAAATACTGCAAAGGCAATTGCTAGGGAATGTGGAATTCTGACCGATGGTATAGCAATTGAAGGCCCGGAGTTCCGTGAAAAGAGTGAGGAGGAATTGCACGATATAATTCCAAAAATTCAGGTGATGGCTCGATCTGCACCAATGGATAAGCATACACTTGTGAAACATTTAAGGACGACATTTGAAGACGTTGTCGCAGTTACTGGTGATGGTACGAATGACGCCCCAGCACTTCATGAAGCAGATATTGGACTTGCAATGGGCATTGCTGGAACTGAGGTAGCAAAAGAAAGTGCTGATGTGATAATATTAGATGATAATTTTTCCACTATAGTGACTGTGGCCAGATGGGGCCGTTCAGTATACATAAACATACAAAAATTCGTGCAGTTCCAGCTAACTGTGAATGTTGTTGCTCTAATTGTTAACTTCTCTTCCGCCTGTTTGACAGGAAATGCTCCCCTCACAGCAGTTCAGCTTCTATGGGTCAACATGATCATGGACACTCTAGGAGCACTTGCACTAGCCACTGAACCTCCGAATGATGACTTAATGAAAAGACCACCTGTTGGTAGGAAAGGAAACTTTATCAGTAATGTTATGTGGAGGAACATCTTGGGGCAGTCTATATATCAATTTGTCATCATCTGGTTCCTCCAGACTAGAGGAAAAGTAGCTTTCCATCTTGAGGACCCGGATTCTGATTTGGTATTGAACACGCTGATTTTCAACTCATTCGTATTCTGTCAGGTTTTTAATGAGATCAGTTCCAGAGAAATGGAAAGGATAAATGTCTTCGAAGGCATACTGAAGAACTATGTGTTTGTGGCTGTCCTCACTTGCACTATTCTCTTCCAAATCATAATTATTGAATTCTTGGGCACGTTTGCAAACACATGTCCCCTCAGTTTGAAGCAGTGGTTTGGTAGTGTTTTCCTTGGATTCCTAGGCATGCCAATCGCAGCAGCTTTAAAGTTGATCCCTGTAGGATCTGTCTGAAATTATCTGCGACGGCTTCCTCTCCAGCCATTGAGTTCATCAAAATTTTGCTATTATGGTTATATTTGTAGAAGTGGAAAAGAACACTCAATACAATCCTAAAGTAGCAGGTGGTCAAACAGCAAATTTGGCTGCAGAAACACTCATGGAAAGAAGGCTGATACAGATAATGCTTGGTGTCTGAGATAGTCGTGGCCGCCATTCACGTTGTTTTTCGATTATAGAATACAATACCCTCGATATGTGTGCTAAATTTTTTTACAGAATGCACAGGTTGGACGGTTTAGAATATTCATTATTGCAAAGTGAAA 3666 0.4179 METYLNENFDVKPKNSSEEALQRWRNLCWLVKNRKRRFRFTANLSKRFEADAIRRSNQEKFRVAVLVSQAALQFIHGLNLLSEYTVPEEVKAAGFEICADELGSIVEGRDVKKLKIHGGVEGVADKLTTSINDGILTSDQLLNQRKEIYGINKFTESPVRGFWIFVWEALQDTTLMILAVCALVSLVVGIIMEGWPKGAQDGIGIVASILLVVFVTATSDYRQSLQFKDLDREKKKITIQVTRNGCRQKISIYDLLPGDIVHLNIGDQVPADGLFVSGFSVLINESSLTGESEPVNVNASNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVLVQGLFNRKLKEGSHWTWSGDDAMEILEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDRALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKACVCGKVKEVGSSKVSSDFLSDLPDSAVRVLLQSIFNNTGGEVVRNKDDEIEILGTPTETALLEFGLSLGGNFQEERLASKIVQVEPFNSLRKRMGVVLQLPDGSFRAHSKGASEIIVDACDKVIDSNGEVVPLHEESINHLKNTIEDFASEALRTLCLAYMEIGSEYSVENPIPITGYTCLGIVGIKDPVRPGVRESVAICRSAGITVRMVTGDNINTAKAIARECGILTDGIAIEGPEFREKSEEELHDIIPKIQVMARSAPMDKHTLVKHLRTTFEDVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVARWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNDDLMKRPPVGRKGNFISNVMWRNILGQSIYQFVIIWFLQTRGKVAFHLEDPDSDLVLNTLIFNSFVFCQVFNEISSREMERINVFEGILKNYVFVAVLTCTILFQIIIIEFLGTFANTCPLSLKQWFGSVFLGFLGMPIAAALKLIPVGSV 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00302 1018 Gene3D - 140 336 - -
Bach12g00302 1018 Pfam E1-E2 ATPase 236 431 - -
Bach12g00302 1018 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 48 IPR024750 GO:0005516
Bach12g00302 1018 Gene3D - 463 659 IPR023299 GO:0000166
Bach12g00302 1018 FunFam Calcium-transporting ATPase 463 659 - -
Bach12g00302 1018 SFLD C1.7: P-type atpase like 435 806 - -
Bach12g00302 1018 SUPERFAMILY Calcium ATPase, transmembrane domain M 117 1014 IPR023298 -
Bach12g00302 1018 FunFam Calcium-transporting ATPase 648 799 - -
Bach12g00302 1018 ProSitePatterns E1-E2 ATPases phosphorylation site. 455 461 IPR018303 -
Bach12g00302 1018 Gene3D - 450 799 IPR023214 -
Bach12g00302 1018 PRINTS H+-transporting ATPase (proton pump) signature 786 811 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bach12g00302 1018 PRINTS H+-transporting ATPase (proton pump) signature 611 629 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bach12g00302 1018 PRINTS H+-transporting ATPase (proton pump) signature 754 770 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bach12g00302 1018 FunFam Calcium-transporting ATPase 771 1017 - -
Bach12g00302 1018 NCBIfam HAD-IC family P-type ATPase 205 376 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bach12g00302 1018 NCBIfam HAD-IC family P-type ATPase 394 476 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bach12g00302 1018 NCBIfam HAD-IC family P-type ATPase 548 700 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bach12g00302 1018 NCBIfam HAD-IC family P-type ATPase 723 835 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Bach12g00302 1018 PRINTS P-type cation-transporting ATPase superfamily signature 674 684 - -
Bach12g00302 1018 PRINTS P-type cation-transporting ATPase superfamily signature 284 298 - -
Bach12g00302 1018 PRINTS P-type cation-transporting ATPase superfamily signature 652 663 - -
Bach12g00302 1018 PRINTS P-type cation-transporting ATPase superfamily signature 754 773 - -
Bach12g00302 1018 PRINTS P-type cation-transporting ATPase superfamily signature 778 790 - -
Bach12g00302 1018 PRINTS P-type cation-transporting ATPase superfamily signature 453 467 - -
Bach12g00302 1018 FunFam Calcium-transporting ATPase 216 336 - -
Bach12g00302 1018 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 459 664 IPR023299 GO:0000166
Bach12g00302 1018 Gene3D - 16 76 - -
Bach12g00302 1018 NCBIfam calcium-translocating P-type ATPase, PMCA-type 111 1015 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bach12g00302 1018 Pfam Cation transport ATPase (P-type) 514 593 - -
Bach12g00302 1018 Gene3D - 168 1012 - -
Bach12g00302 1018 Pfam Cation transporting ATPase, C-terminus 839 1013 IPR006068 -
Bach12g00302 1018 SUPERFAMILY HAD-like 451 859 IPR036412 -
Bach12g00302 1018 Pfam haloacid dehalogenase-like hydrolase 649 768 - -
Bach12g00302 1018 PANTHER CATION TRANSPORTING ATPASE 84 1015 - -
Bach12g00302 1018 SUPERFAMILY Calcium ATPase, transduction domain A 238 333 IPR008250 -
Bach12g00302 1018 FunFam Calcium-transporting ATPase 16 76 - -
Bach12g00302 1018 Pfam Cation transporter/ATPase, N-terminus 118 185 IPR004014 -
Bach12g00302 1018 CDD P-type_ATPase_Ca_PMCA-like 142 887 - -
Bach12g00302 1018 SFLD p-type atpase 435 806 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00302 Bach-Chr12 2004821 2010304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00302 1 1017 Primary Pumps ATPases AT1G27770 82.041 0.0 1706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00302 K01537 - qsa:O6P43_019010 1771.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00302 12 2004821 2010304 Bach12g00302 12 2004821 2010304 ECH