Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00296 ATGGAACCTATTGGAGCCTTCCCCGATGGAGAATGGGATTGCTTTCGTCAAATGTTTGCCACTGGAGAGCTTGATTACTCACCAAAATTTCTAGCTCATACTTCATTTCTGGATGGGGAGGATGATGGATTGAACATTGGAACGGAACCCACGTTCTGTTCTACTTCTGAAGCTGGGGAGAATGAGAGTATGTTTTATCCTTTGGAAGCACTTAACTCCAATTTGCAGTATAGTTATCAAGAAAGTAGTTACCTAAGTGATTGTAGTAATGGTAATGTCTTCATAGCCGATCCGGGCCTCGCAAACTACTACTTCGGTGATTCTGATCACGTTTGCATGATGGATGAGAAGAACACCAACTCCTTCATCCCTTCGCTTACTGACATTGCAGTAGTAGAGACTCTCAGCCTGAATGAAAATGACAGCACTGAGAGATTGGAGAAATCTGATTACAGGGCAGCAGAACCTACTGTCATTCTTGCCAAACAGTTGCAGCTGAAAAGGAAGCTCGACATGCCAGAACAGGAGGTTCCTGGAGAAGATAAAAGAAACGTCAACTCATCTGAAAATCAGAAGATAAAGCCTCGTATAACAAGAGATATGCAGAGATGTAAGAACAATGCACGTCCAAAGAAGAACCAGAAGCCCACCCATAATGGCAACGAGGAAGAAGAGACTAATACCGGATCAGATGGACAGAGCTCTAGTAGTTACAGCTCGGAGGATGTTGATGCATCTCAGGAAAATAGTGGAGGCACGAGTTCAACTTCTAAATCAACGGTATCTCTCAACGTAAATGGGAAGACAAGAGCCAGTAGGGGATCAGCAACAGATCCCCAAAGTCTTTATGCCAGGAAAAGAAGAGAGAGGATAAATGAACGACTAAGAATCCTCCAGAATCTTGTCCCTAACGGAACTAAGGTTGATATTAGCACAATGCTTGAAGAGGCAGTACACTACGTGAAGTTCTTGCAACTCCAAATTAAGCTCTTAAGCTCTGATGATCTTTGGATGTACGCTCCTATTGCTTACAATGGAATGGATATTGGATGCAATCTCAACCGGAAGATATCTCTACCACTATGA 1086 0.4309 MEPIGAFPDGEWDCFRQMFATGELDYSPKFLAHTSFLDGEDDGLNIGTEPTFCSTSEAGENESMFYPLEALNSNLQYSYQESSYLSDCSNGNVFIADPGLANYYFGDSDHVCMMDEKNTNSFIPSLTDIAVVETLSLNENDSTERLEKSDYRAAEPTVILAKQLQLKRKLDMPEQEVPGEDKRNVNSSENQKIKPRITRDMQRCKNNARPKKNQKPTHNGNEEEETNTGSDGQSSSSYSSEDVDASQENSGGTSSTSKSTVSLNVNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGCNLNRKISLPL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00296 361 SMART finulus 281 330 IPR011598 GO:0046983
Bach12g00296 361 MobiDBLite consensus disorder prediction 226 279 - -
Bach12g00296 361 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 275 340 IPR036638 GO:0046983
Bach12g00296 361 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 275 324 IPR011598 GO:0046983
Bach12g00296 361 MobiDBLite consensus disorder prediction 170 287 - -
Bach12g00296 361 MobiDBLite consensus disorder prediction 170 207 - -
Bach12g00296 361 FunFam Basic helix-loop-helix transcription factor 276 333 - -
Bach12g00296 361 Gene3D - 277 333 IPR036638 GO:0046983
Bach12g00296 361 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 137 348 - -
Bach12g00296 361 Pfam Helix-loop-helix DNA-binding domain 285 325 IPR011598 GO:0046983
Bach12g00296 361 CDD bHLH_AtIND_like 276 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00296 Bach-Chr12 1972430 1973926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00296 234 350 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 76.860 6.53e-58 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach12g00296 HLH 1.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00296 - - qsa:O6P43_015996 400.208