Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00275 ATGGCGTCAACAAAGAAAGAGGTGGACCGAATTAAAGGTCCCTGGAGTCCCGAAGAAGACGAAGCGTTACAGAGGCTGGTACAGAATTACGGGCCTAGAAACTGGTCTCTCATCAGCAAATCAATTCCTGGTCGATCCGGAAAGTCTTGTCGTTTACGTTGGTGCAACCAGCTCTCCCCCCAAGTGGAGCATAGGCCTTTCACTCCTGAAGAAGATGAAACCATCATAAGAGCCCACGCAAGGTTCGGTAACAAGTGGGTTGCCATTGCTCGCTTGCTCAATGGTCGCACCGACAACGCCATTAAAAACCACTGGAATTCTACCCTGAAGAGGAAGTGCTCTGCCATCGATGATAATTTGAACGCCGATCCACATGATCAGCGGCCTCTCAAAAGATCCGCCAGTGTCGGTGCGGCCACCACTGTTTCGGATTTGTATTTGAATCCGAGTAGCCCATCGGGATCCGAATTGAGCAATTCTGGTTTGCCTGCTATGTGCACTGGCCCCACACAGGTTTACAAACCTCTTGCCCGGAGCACATCGTTACAGGTGCAGGTTCCACCAACCCATCAAGTAGAAACTTCCTCCTCTGTCTCTGATCCACCCACTTCACTCAGCTTGTCACTTCCTGGATCCGATTCCTTTGAGGTATCTAACCACGGGTCCGGATTTAGTCCGGTTTCTAGTCCCACTCAGTGGATCCAGCCGAAAGTACAACTGCCTCCACCATCACAAACTGGGCCATTTCAGCAAGTGCTTCTCCATGATCAAAACATTCAGGCCCGTGATCAGTTTGGTTATGAGAAGCAGTTCTTCAGCACCGAGTTCTTGACCGTGCTGCAAGAGATGATAAGAAATGAAGTGAGAAATTACATGTCTGGGATTGAGCAGAATGGTTTGTGTTTGCAGGCCGATGCCATTCGAAACGCTGTTGTGAAGCGAATTGGGATTAGCAAGGTGGAATAG 966 0.4959 MASTKKEVDRIKGPWSPEEDEALQRLVQNYGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRPFTPEEDETIIRAHARFGNKWVAIARLLNGRTDNAIKNHWNSTLKRKCSAIDDNLNADPHDQRPLKRSASVGAATTVSDLYLNPSSPSGSELSNSGLPAMCTGPTQVYKPLARSTSLQVQVPPTHQVETSSSVSDPPTSLSLSLPGSDSFEVSNHGSGFSPVSSPTQWIQPKVQLPPPSQTGPFQQVLLHDQNIQARDQFGYEKQFFSTEFLTVLQEMIRNEVRNYMSGIEQNGLCLQADAIRNAVVKRIGISKVE 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00275 321 FunFam MYB transcription factor 12 63 - -
Bach12g00275 321 MobiDBLite consensus disorder prediction 181 209 - -
Bach12g00275 321 Pfam Myb-like DNA-binding domain 15 73 - -
Bach12g00275 321 SUPERFAMILY Homeodomain-like 9 105 IPR009057 -
Bach12g00275 321 Gene3D - 65 134 - -
Bach12g00275 321 SMART sant 63 111 IPR001005 -
Bach12g00275 321 SMART sant 11 60 IPR001005 -
Bach12g00275 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 62 IPR017930 -
Bach12g00275 321 CDD SANT 14 56 IPR001005 -
Bach12g00275 321 MobiDBLite consensus disorder prediction 144 163 - -
Bach12g00275 321 PANTHER MYB PROTEIN-RELATED 12 183 - -
Bach12g00275 321 ProSiteProfiles Myb-like domain profile. 7 58 IPR001005 -
Bach12g00275 321 CDD SANT 66 109 IPR001005 -
Bach12g00275 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 113 IPR017930 -
Bach12g00275 321 FunFam Transcription factor MYB44 66 112 - -
Bach12g00275 321 Gene3D - 11 63 - -
Bach12g00275 321 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00275 Bach-Chr12 1852697 1853662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00275 4 321 MYB Transcription Factor Family AT4G37260 46.724 2.99e-94 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach12g00275 Myb_DNA-bind_6 6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00275 K09422 - qsa:O6P43_016026 425.631