Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00267 ATGGCTGTGGAGCTTTTAACGGGTTATGGGGATGATAGGTTTGCAGCGAGGTCGGAAGATAATGCCAGTGCGGTACAGGAAGCAGCTGCTGCGGGTATTCATAGCATTGAGAGGCTCATGACTACGATTTCTCAACAGCAGGAAAAGGAATCAAGCTCCCGAGGGGGCCCTTCGGAATTTGGAGCTGTTGCAGATGTGGCCGTGAATAAGTTCAGAAAGTTTGTTTCTCTTCTTGATAGGCAAAGAATTGGTCATGCTCGTTTCAGAAAAGCTCCGGCAGCTGCATCATCCACTCTGCCATCTATTCCTCTCATGCCATTAAAACAGATGGTGGATTCAGAATCAAAACTTGTGCAGCCCCAACCAATAAAAACAGAACAAGTCTCTGCTTTCAAGGTTTATTCTCCTACTCTGGTTTCACGTCTACCTCCTCTACCTCAGAATCACCGCCAATTGCCACAACCCTTACCCTTTCACCCTCATCGCCAACTCAATCGGGGCTCTGCTTCTGCCTCAGTTAACAGTGGATTTGTAGAGAAGAAAGACGCACATGGCACGATCAAATTCTTGGCTTCTCCATCGGTTTCTGCGGCCAATTCGTTTATGTCTTCATTGTCAGGTGAAGGTGATAGTATGGCACAACCCTCTCAATTTTCAAACATGTCAATGTCACAGCAGGGGTCTTATGTGGGTAAATCTCCTCTGTCTTCAAACTCTATGAAGAGGAAGTGTAACTCGATGGACGATGCTGCCTTCAAGCGGGCATCTTCTTCTGAGCGTTGCCATTGCTCCAAGAAAAGGAAATCTAAGATTAGGAGAGTGACAAGAGTACCAGCAATTAGCTCCAAGATTGCTGATATCCCACCTGATGATTACTCGTGGAGAAAATACGGACAGAAACCCATCAAGGGCTCTCCCCATCCTAGAGGTTACTACAGGTGTAGTAGTGTGAGAGGATGCCCAGCACGTAAGCACGTGGAGCGTGCTTTGGACGAGCCTACCATGCTTATTGTCACGTACGAGGGAGATCATAATCACGCACGCACCGCTTCTGATCTCCCACCTGTTGCCGTTCTGGAATCATCATAG 1089 0.4757 MAVELLTGYGDDRFAARSEDNASAVQEAAAAGIHSIERLMTTISQQQEKESSSRGGPSEFGAVADVAVNKFRKFVSLLDRQRIGHARFRKAPAAASSTLPSIPLMPLKQMVDSESKLVQPQPIKTEQVSAFKVYSPTLVSRLPPLPQNHRQLPQPLPFHPHRQLNRGSASASVNSGFVEKKDAHGTIKFLASPSVSAANSFMSSLSGEGDSMAQPSQFSNMSMSQQGSYVGKSPLSSNSMKRKCNSMDDAAFKRASSSERCHCSKKRKSKIRRVTRVPAISSKIADIPPDDYSWRKYGQKPIKGSPHPRGYYRCSSVRGCPARKHVERALDEPTMLIVTYEGDHNHARTASDLPPVAVLESS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00267 362 Pfam WRKY DNA -binding domain 290 346 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach12g00267 362 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 25 351 IPR044810 GO:0003700
Bach12g00267 362 Pfam Plant zinc cluster domain 241 286 IPR018872 -
Bach12g00267 362 SMART WRKY_cls 288 348 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach12g00267 362 Gene3D WRKY domain 274 348 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach12g00267 362 ProSiteProfiles WRKY domain profile. 283 349 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach12g00267 362 MobiDBLite consensus disorder prediction 208 242 - -
Bach12g00267 362 FunFam WRKY transcription factor 65 272 349 - -
Bach12g00267 362 SUPERFAMILY WRKY DNA-binding domain 286 347 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00267 Bach-Chr12 1800918 1802234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00267 15 309 WRKY Transcription Factor Family AT4G24240 45.981 4.90e-68 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bach12g00267 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00267 - - qsa:O6P43_016034 423.705