Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00262 GAGGAAGAAAGGTACTCGTCATATATATATATATAAAGACTATATGGTTATACTCAAGAAAAGGCTAAGCCGTGATTAATATGGAAGAAAGAGATTGTTGTTCGATGACAAGCAGCCCAGAGAAGAGAAAGCATCACCAGCACCAAGCTCAAACAACTGCAGGAACAGCAAGAGAGAAGAAAGACAAAGAGAAACCGTACAGAGGGATAAGGATGAGGAAGTGGGGAAAGTGGGTGGCTGAGATTCGGGAACCAAACAAAAGGTCAAGGATATGGCTTGGTTCTTACACCACACCCGTCGCCGCCGCCCGCGCTTACGATACCGCCGTTTTTTTTCTGAGAGGACCTTCCGCTCGCCTTAACTTCCCCGAATTGTTATTCCAAGAAGACAACCATTTCGTCCGAGGTGAAGGCGCCGACTTGTCTGCCGATTCCATACGAAAGAAAGCCACCGAAGTCGGAGCTAGAGTTGATGCCCTCCAAACCGCTCTTCATGCCTCTTCCCAATCCAGTTCCAGTAACACCTCTTCAGAGAAACCTGACTTGAACGAGTATCCCAAACCCGAAGACTCTGTTGACGATTGAATGGAAGAAAGAGATTGTTGTTCGATGACAAGCAGCCCAGAGAAGAGAAAGCATCACCAGCACCAAGCTCAAACAACTGCAGGAACAGCAAGAGAGAAGAAAGACAAAGAGAAACCGTACAGAGGGATAAGGATGAGGAAGTGGGGAAAGTGGGTGGCTGAGATTCGGGAACCAAACAAAAGGTCAAGGATATGGCTTGGTTCTTACACCACACCCGTCGCCGCCGCCCGCGCTTACGATACCGCCGTTTTTTTTCTGAGAGGACCTTCCGCTCGCCTTAACTTCCCCGAATTGTTATTCCAAGAAGACAACCATTTCGTCCGAGGTGAAGGCGCCGACTTGTCTGCCGATTCCATACGAAAGAAAGCCACCGAAGTCGGAGCTAGAGTTGATGCCCTCCAAACCGCTCTTCATGCCTCTTCCCAATCCAGTTCCAGTAACACCTCTTCAGAGAAACCTGACTTGAACGAGTATCCCAAACCCGAAGACTCTGTTGACGATTGAAATTCAAAACATATTTATAATACAAGTTGAGGCAACTCAAGCCGTTCAAAACTCCACTCTCCCCTTTCCCCTTTTTCTTTTTCGTCTTCTTTTTTATAGTTTCTAGTTTTTATTTGTTAACTTCTTCAACTTAATCTGAAAGCATA 1234 0.4652 MEERDCCSMTSSPEKRKHHQHQAQTTAGTAREKKDKEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFFLRGPSARLNFPELLFQEDNHFVRGEGADLSADSIRKKATEVGARVDALQTALHASSQSSSSNTSSEKPDLNEYPKPEDSVDD 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00262 167 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Bach12g00262 167 FunFam Ethylene-responsive transcription factor 2 38 97 - -
Bach12g00262 167 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Bach12g00262 167 MobiDBLite consensus disorder prediction 136 154 - -
Bach12g00262 167 Gene3D AP2/ERF domain 39 97 IPR036955 GO:0003700|GO:0006355
Bach12g00262 167 MobiDBLite consensus disorder prediction 1 21 - -
Bach12g00262 167 CDD AP2 40 98 IPR001471 GO:0003700|GO:0006355
Bach12g00262 167 MobiDBLite consensus disorder prediction 136 167 - -
Bach12g00262 167 MobiDBLite consensus disorder prediction 1 38 - -
Bach12g00262 167 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 17 164 - -
Bach12g00262 167 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Bach12g00262 167 PRINTS Ethylene responsive element binding protein signature 78 98 IPR001471 GO:0003700|GO:0006355
Bach12g00262 167 Pfam AP2 domain 40 88 IPR001471 GO:0003700|GO:0006355
Bach12g00262 167 SUPERFAMILY DNA-binding domain 39 97 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00262 Bach-Chr12 1763723 1764452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00262 28 167 AP2-EREBP Transcription Factor Family AT2G23340 59.477 6.40e-55 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach12g00262 AP2 4.3e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00262 K09286 - qsa:O6P43_016042 207.223