Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00261 ATGGGAACTCGAAGCATGAAGGTGCATCAGTTGGCACGTGGATTCTGGGAGCATGAACCCTCTCTCTCCCTTGGTTGCAAGCGCTTACGCCCCCTTGCTCCCAAGCTTCCTAACTCCGAAACTTCTGTTGCTGCTTTCGATCTCAAGAGCTTCATCAGACCCGAAAGTGGCCCCATCATACTTGGTTCTTCAGACCATAATAAGAAAGATTCAACACCCCAATCCCAGCAGATGGAAACGCATCCAGGTGGGACACGGTGGAATCCGACGCAAGAACAGATAGGATTATTGGAGATGTTATACAGAGGTGGGATGAGAACTCCCAATGCTCAACAAATAGAACAGATCACAGCTCAGCTTGGCAAATACGGCAAAATCGAAGGCAAAAATGTTTTCTATTGGTTCCAAAATCACAAAGCACGCGAAAGACAAAAGCAGAAGCGCAACAGCCTTGGTCTTAGTCATAGTCCACGAACTCCACCACCCATTACTACTATAACTTTGGAGACAAGGGGGGAACTGGAGGAAAGAGAGGAAGATAGTCCGTACAAGAAGAAGTGTAGGAGCTGGGGATTTGAGTACTTGGAGGAGCAAAGCAGGTCACCATGTGATAAAGAGGAGGAACATAGAACTCTGGAGCTTTTCCCATTACACCCGGAAGGCAGATGA 669 0.4768 MGTRSMKVHQLARGFWEHEPSLSLGCKRLRPLAPKLPNSETSVAAFDLKSFIRPESGPIILGSSDHNKKDSTPQSQQMETHPGGTRWNPTQEQIGLLEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLSHSPRTPPPITTITLETRGELEEREEDSPYKKKCRSWGFEYLEEQSRSPCDKEEEHRTLELFPLHPEGR 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00261 222 MobiDBLite consensus disorder prediction 170 184 - -
Bach12g00261 222 CDD homeodomain 85 146 IPR001356 GO:0003677
Bach12g00261 222 SMART HOX_1 82 149 IPR001356 GO:0003677
Bach12g00261 222 Gene3D - 66 153 - -
Bach12g00261 222 MobiDBLite consensus disorder prediction 150 166 - -
Bach12g00261 222 SUPERFAMILY Homeodomain-like 79 151 IPR009057 -
Bach12g00261 222 PANTHER WUSCHEL-RELATED HOMEOBOX 4 6 222 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Bach12g00261 222 MobiDBLite consensus disorder prediction 59 90 - -
Bach12g00261 222 FunFam WUSCHEL-related homeobox 4 84 151 - -
Bach12g00261 222 Pfam Homeodomain 85 144 IPR001356 GO:0003677
Bach12g00261 222 MobiDBLite consensus disorder prediction 65 90 - -
Bach12g00261 222 MobiDBLite consensus disorder prediction 197 222 - -
Bach12g00261 222 ProSiteProfiles 'Homeobox' domain profile. 80 145 IPR001356 GO:0003677
Bach12g00261 222 MobiDBLite consensus disorder prediction 143 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00261 Bach-Chr12 1754837 1755738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00261 6 151 Wox Gene Family AT1G46480 64.815 1.47e-63 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bach12g00261 Homeodomain 1.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00261 - - tcc:18591159 337.035