Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00244 ATGGCGGTGGCAATAGGGAGAGGCTTCCCATTTCAGCCATGCTCTGTACTCAAGAGTAAGAAGATAGATAAAGCTTCACTGGGTCTAGGTGGGAGTGTGTCGTGGCTCCAGCCTGCTGGTGTAGAAATTACTAGGAGATATTCTCGAACTTGTGTGGCAGCCCAGCAAAAACAACGACCTACATGGCTCCCAGGGCTTGATCCCCCACCTTATCTTGATGGAACTCTGCCCGGAGATTTTGGGTTCGACCCACTTGGACTTGGTGAGAATCCCGAAAGCTTAAGGTGGTATGTGCAAGCAGAGCTGGTTCATGCTCGATTTGCAATGATTGGAGTTACTGGAATTCTACTCACAGATATACTTCGCATCACAGGACTTAGTAAGATACCAGTTTGGTTTGAAGCCGGCGCAGTAAAATATGAATTTGCCAACACAGAGACTCTGTTCCTCGTCCAGCTACTTTTGATGGGATTTGTTGAAACAAAAAGGTACATGGATTTTGTTAGTCCAGGATCTCAAGCTAAAGAGGGATCCTTCTTTGGATTGGAAGCTTCGTTTGCTGGTTTAGAACCAGGATACCCTGGAGGTCCTCTGCTGAATCCTCTTGGTTTCGCTAAAGATATAAAAAACGCTCATTACTGGAAGCTCAAAGAGATTAAAAACGGTCGACTTGCAATGGTGGCAATGCTTGGCATCTTTGTTCAAGCTTCAGTCACTCACGTTGGACCAATTGATAACCTTGTGGAACATCTCTCCAATCCATGGCACAAAACTATTATTCAGACGCTTTCCAACTCTAGCTCTTAG 807 0.4548 MAVAIGRGFPFQPCSVLKSKKIDKASLGLGGSVSWLQPAGVEITRRYSRTCVAAQQKQRPTWLPGLDPPPYLDGTLPGDFGFDPLGLGENPESLRWYVQAELVHARFAMIGVTGILLTDILRITGLSKIPVWFEAGAVKYEFANTETLFLVQLLLMGFVETKRYMDFVSPGSQAKEGSFFGLEASFAGLEPGYPGGPLLNPLGFAKDIKNAHYWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQTLSNSSS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00244 268 FunFam Chlorophyll a-b binding protein, chloroplastic 60 267 - -
Bach12g00244 268 Pfam Chlorophyll A-B binding protein 68 236 IPR022796 -
Bach12g00244 268 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 55 265 IPR001344 GO:0009765|GO:0016020
Bach12g00244 268 Gene3D Chlorophyll a/b binding protein domain 61 268 - -
Bach12g00244 268 SUPERFAMILY Chlorophyll a-b binding protein 55 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00244 Bach-Chr12 1638086 1639445 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00244 43 264 Chloroplast and Mitochondria Gene Families AT3G61470 43.498 5.76e-61 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00244 K08911 - qsa:O6P43_018922 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00244 12 1638086 1639445 Bach12g00244 12 1638086 1639445 ECH