Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00215 ATGGAAGCAACGAATAGATGCTCCTCCTCCACTTCATCCAGCTCTGACTCATCCTCTTCTGAGTCTAATTCCTTGTCGAGCAAGACGGCAAGAAATTGCAACAAAGCAGAGAGAATCAAAGGTCCATGGAGCGCCGAAGAAGACCGGATTCTGACTCGGCTTGTTGAAAGATACGGGCCACGGAATTGGTCACTGATAAGCCGTTACATAAAGGGGAGGTCTGGCAAATCTTGTCGACTTAGATGGTGTAACCAGCTGAGCCCAAGCGTGGAGCACCGCCCATTCTCAGCGGAAGAAGACGAGACCATTTTGGCGGCACATGCCCAGTACGGTAACAGGTGGGCCACCATTGCACGCCTATTACCGGGTCGAACAGACAATGCCGTCAAGAACCACTGGAACTCCACGCTCAAGCGAAGGGTAAAACAAGGGGGCACAAGAGGAGAAGATCTCGGCGTCAGGGATAGTGTTAGTGTTATTCACCAAACGGAAAGGGCAACTTCTCCGGCATCTTTGCAGCCCGGCATGGGAATGGGATTGGAAGATGATCCGTTGACCGCGTTGACTCTGGCACCCCCTGGACTTGCGATGCCAGATCAACCGCCCACCCAGAATACGCCGACGTCCCCGTTTTGGGATGTGATGAGAAATGTGATTGCCCGGGAAGTTAGAGATTATGTGTCTTCTGCATTTACTGATAATTCGGCTTTTCACTGA 717 0.5174 MEATNRCSSSTSSSSDSSSSESNSLSSKTARNCNKAERIKGPWSAEEDRILTRLVERYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSAEEDETILAAHAQYGNRWATIARLLPGRTDNAVKNHWNSTLKRRVKQGGTRGEDLGVRDSVSVIHQTERATSPASLQPGMGMGLEDDPLTALTLAPPGLAMPDQPPTQNTPTSPFWDVMRNVIAREVRDYVSSAFTDNSAFH 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00215 238 SMART sant 91 139 IPR001005 -
Bach12g00215 238 SMART sant 39 88 IPR001005 -
Bach12g00215 238 CDD SANT 94 137 IPR001005 -
Bach12g00215 238 MobiDBLite consensus disorder prediction 1 32 - -
Bach12g00215 238 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 90 IPR017930 -
Bach12g00215 238 Gene3D - 93 156 - -
Bach12g00215 238 FunFam MYB transcription factor 40 91 - -
Bach12g00215 238 CDD SANT 42 84 IPR001005 -
Bach12g00215 238 ProSiteProfiles Myb-like domain profile. 35 86 IPR001005 -
Bach12g00215 238 SUPERFAMILY Homeodomain-like 38 133 IPR009057 -
Bach12g00215 238 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 141 IPR017930 -
Bach12g00215 238 MobiDBLite consensus disorder prediction 190 210 - -
Bach12g00215 238 MobiDBLite consensus disorder prediction 1 33 - -
Bach12g00215 238 PANTHER MYB PROTEIN-RELATED 40 173 - -
Bach12g00215 238 Gene3D - 39 91 - -
Bach12g00215 238 ProSiteProfiles Myb-like domain profile. 87 137 IPR001005 -
Bach12g00215 238 Pfam Myb-like DNA-binding domain 43 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00215 Bach-Chr12 1464029 1464745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00215 36 150 MYB Transcription Factor Family AT5G67300 77.391 1.03e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach12g00215 Myb_DNA-bind_6 1.6e-17 CL0123