Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00213 AAATTTTACAAAGTAAACAAAATCAAGAAATACCCAAGGTGTTTCCCCATGGCTTCCTAATGCCAAAGCCTCGTTTTTTTTAAGCAATTTCACATGACGACTTCTGTTCTACCTGCAAACAGACTCTCTCAGCCTCTCACCGATGCCTTTCTCTTGCAAGTCTTATTCTTCTTCTTCTCCTTCACCCCGTACGCCTTCCATCGTTTCCCGTGTCCAACAATCGAACGGTGATGGCAATGCCAATAATTTCGTTCACAGCAAGGGGCAATCGTTTCAGAAGCGCCGGCTTACCAGACAGAGGAAGCTCCGGTACCTTAGCGACATCAGCTTGCACTTTACCGAGACATCTTCTTTACCGGCTACGCCTAAGTCACATCGTAAGTCCCCGTCTGCGGTGCCGCAACCGTTGCCGCTCCCGGAATCATCGTTAATCCGAAGACCGGAGTCAACCACTCCAAATTCCGGCCAGGCCCAGCTAGGATCTCCTCCCGTGGAACATCCCAGCTTTGCTTTCGGGAGGAAGACAATGGATTCTGCTGCTACAAATATGAAATCTTCAAGCAAGGAAGACAGACGACTCTCTTGTGATATAGAGAGTATTTACAATTTGAGGTTGCCTGTTTCTGCCAAGAGTGCTCCAACAACTGTTTTCTCCAGTCCTGTTAGTAGTCCCCGTAGGTCAAGCAATGTAGATTTCTTCGATCCTTCAATCGTTGTTCATCAAGATCATACTCCTCTTCGTAGTCCAGGGAGCCAGAGTCCTTTCGTCAATCCTAGAATTAGAGAATCACCTCAGCACCATGAATTCTTTTCCAGGGTGTGGCCTGAAAATAACCACGTCGATGCGCATCCATTGCCCCTTCCTCCGGGAGCTATGTCACCTGTACCATCATTCGTCCAGCAACAACATCAATCAAGTGCCACTCACCACAGTGGAGAAAATTCACCCCCGATAAAAGGCAAATGGCAAAAAGGAAAACTTATTGGACGTGGTACATTTGGAAGTGTTTATCACGCAACCAACCTAGAAACTGGAGCATCGTGTGCAATGAAGGAAGTGGACATTATTCCTGATGATCATAAATCCCTTGAGTGTGTAAAGCAACTAGAGCAGGAAATCAAAATTCTCCGTCAACTGAACCATCCAAATATTGTACGATATTATGGCAGTGAAATAGTTGGTGATCATTTATACATATACATGGAGTATATTCATCCTGGTTCGATCAATAAATTTGTGCGTAACAATTGCGGAGCTATGACAGAGTCTGTAGTTCGCAATTTTACCCGCCATATTCTCTCTGGCTTGGCTTACTTGCACAGCACCAGCACTATCCACAGAGATATTAAAGGTGCAAACTTGCTGGTTGATTCATCAGGCATTGTCAAGCTTGCAGATTTTGGGATGGCTAAAGTTCTTACAGGGCAATCATATGATCTTTCATTAAAGGGCAGTCCATATTGGATGGCTCCAGAGGTTATGCAGGCTGCCATGAAGAAAGATACCAATCCTGCCCTTGCCTTGGCTGTTGATATATGGAGCTTAGGGTGCACCATCATCGAAATGCTGACAGGCAAACCTCCTTGGAGAGAATATGAAGGGCCTACCGCCATGTTCAAGGTTCTGAATCAAACCCCACCTATACCAGAAACATTATCACTGGAGGGAAAGGATTTTCTCCAGCAATGTTTTATTAGAAATCCTGCAGAGCGACCATCTGCAGCAAAGCTTCTCGACCATGCCTTTGTAAGAAACTTGCAAGATCATGATCAAGGTGCTTTAGTTCGACCACAAGGACATCTGGGATTAGACACAGGAGATAATTCAAGAAGGCCCAGAAACTCCGCTAAACAAAGCCGTGATGTAAAAGCAAAATCATCCTCCATGGGCACGCGGATTATGAACAAAATTCATAAATTAATCGGTGGTACTTCCCACCAATATGTTGGTGAAGAATCTAACTCTAATACATCTTCTCATTCCTCTGGACCAGAAGTTAATATTCGTCAATCTACCTTGAAACCCAAGGCCCTCAATTACATGTCTGTTATGAGAATCATCACGCACCTCTGA 2074 0.4474 MPFSCKSYSSSSPSPRTPSIVSRVQQSNGDGNANNFVHSKGQSFQKRRLTRQRKLRYLSDISLHFTETSSLPATPKSHRKSPSAVPQPLPLPESSLIRRPESTTPNSGQAQLGSPPVEHPSFAFGRKTMDSAATNMKSSSKEDRRLSCDIESIYNLRLPVSAKSAPTTVFSSPVSSPRRSSNVDFFDPSIVVHQDHTPLRSPGSQSPFVNPRIRESPQHHEFFSRVWPENNHVDAHPLPLPPGAMSPVPSFVQQQHQSSATHHSGENSPPIKGKWQKGKLIGRGTFGSVYHATNLETGASCAMKEVDIIPDDHKSLECVKQLEQEIKILRQLNHPNIVRYYGSEIVGDHLYIYMEYIHPGSINKFVRNNCGAMTESVVRNFTRHILSGLAYLHSTSTIHRDIKGANLLVDSSGIVKLADFGMAKVLTGQSYDLSLKGSPYWMAPEVMQAAMKKDTNPALALAVDIWSLGCTIIEMLTGKPPWREYEGPTAMFKVLNQTPPIPETLSLEGKDFLQQCFIRNPAERPSAAKLLDHAFVRNLQDHDQGALVRPQGHLGLDTGDNSRRPRNSAKQSRDVKAKSSSMGTRIMNKIHKLIGGTSHQYVGEESNSNTSSHSSGPEVNIRQSTLKPKALNYMSVMRIITHL 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00213 643 ProSitePatterns Protein kinases ATP-binding region signature. 281 304 IPR017441 GO:0005524
Bach12g00213 643 ProSiteProfiles Protein kinase domain profile. 275 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g00213 643 MobiDBLite consensus disorder prediction 1 43 - -
Bach12g00213 643 MobiDBLite consensus disorder prediction 97 114 - -
Bach12g00213 643 MobiDBLite consensus disorder prediction 69 123 - -
Bach12g00213 643 MobiDBLite consensus disorder prediction 559 573 - -
Bach12g00213 643 SUPERFAMILY Protein kinase-like (PK-like) 252 544 IPR011009 -
Bach12g00213 643 MobiDBLite consensus disorder prediction 241 276 - -
Bach12g00213 643 FunFam Mitogen-activated protein kinase kinase kinase 5 272 574 - -
Bach12g00213 643 Gene3D Transferase(Phosphotransferase) domain 1 272 560 - -
Bach12g00213 643 MobiDBLite consensus disorder prediction 550 582 - -
Bach12g00213 643 SMART serkin_6 275 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g00213 643 Pfam Protein kinase domain 276 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g00213 643 MobiDBLite consensus disorder prediction 248 266 - -
Bach12g00213 643 MobiDBLite consensus disorder prediction 1 50 - -
Bach12g00213 643 MobiDBLite consensus disorder prediction 600 623 - -
Bach12g00213 643 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 11 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00213 Bach-Chr12 1453280 1457516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00213 37 538 MAP Kinase Kinase Kinase AT5G66850 47.684 2.91e-154 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bach12g00213 Pkinase 4.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00213 - - pcin:129303344 743.421