LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach12g00209	CTGCGATTCCCTCTTTTGCCTTCATCTCAAAGTTTCGATTCAACTCTTCCGTCTCCGTTTCACTGGTTTTTTCAGTGGAAATGGCTCAAATCGCTTGCTAGAGTTTCCTAGATCTCATATATTACTCTCGGAAACTACAGTGTACCTATTATTTATCAATCTAATCAAGATTGCAGTTATGGCTATCCGGGTTACTTTCGGCTTCTCTGGTTATGTCGCCCAAAGCCTGGTGTCGTCGGCCGGTACTCGTATGGGTAATTCGCGCTGCTTTCAGGAATGCTGGATCAGGTCTCGCATATTCGGCCCTAGCCAGAAGCCCGATCTCGACCTCTCTTGTGGCGTGCGTAACTACCAGTCCGATTTCAGACGTCCGAAATCGAATTGCTGGGTTAGTCATTCAGCTTCAACGTATGCAACTATCGCTGGGGAGATTTTTGGTGACAATTGCAGAAGTCCGATCATTCTGTCTTTGATTTCGATGATGAAGTCAACGGTTTCTGTATCTGGTTCATCCACCACGACTATGGGTACCTATGGTATTTCTCCGATTAAGGCCGCTTCGATTATACCCTTTTTACAGGGATCGAAGTGGCTTCCCTGTAATGAGTCATTGCCTGTTCCTACGAGCCATGAAGTGGATAAAGGCGGAACAGAGTGTTTTGGTGATAAGGATTCTGGATTTAGTCACAAGGGTTTTGACAAGACGAGTTGGCTTTCACGCTTGTTGAATGTCTGTTCTGAAGATGCAAAGGCGGTGTTTACTGCTGTCACTGTTAATTTGCTATTTCGGTCGTTCTTGGCTCAACCGAGATCGATTCCCTCGTCTTCTATGTACCCAACTCTGGACGTGGGTGACCGTATTTTAACAGAGAAGGTTTCTTTCTTGGTCAGAAAGCCTGATGTTTCAGATATAGTTATATTTAAGGCCCCTCCTATTCTACAGGAAGTTGGTTTTGGTTCTTCTGATGTATTTATCAAACGTATCGTGGCAAAGGCTGGGGACTGTGTTGAAGTCCGGGATGGAAAACTACTTGTGAATGGTGTTCCTCAAGAAGAGGAATTTGTTTTGGAGCCCCTTGCTTATGAGATGGATCCAATAGTAGTCCCTGAAGGTTATGTCTTTGTACTGGGAGACAATCGAAATAACAGCTTTGATTCACATAACTGGGGTCCACTCCCCGTGGAGAACATTGTTGGTAGATCAATGCTTCGGTACTGGCCTCCATCTAAAGTATCTGACATTGGTTACAAACGACCTTCTGAAAATAGTTCCTTTGCAATTTCTTGA	1288	0.4457	MAIRVTFGFSGYVAQSLVSSAGTRMGNSRCFQECWIRSRIFGPSQKPDLDLSCGVRNYQSDFRRPKSNCWVSHSASTYATIAGEIFGDNCRSPIILSLISMMKSTVSVSGSSTTTMGTYGISPIKAASIIPFLQGSKWLPCNESLPVPTSHEVDKGGTECFGDKDSGFSHKGFDKTSWLSRLLNVCSEDAKAVFTAVTVNLLFRSFLAQPRSIPSSSMYPTLDVGDRILTEKVSFLVRKPDVSDIVIFKAPPILQEVGFGSSDVFIKRIVAKAGDCVEVRDGKLLVNGVPQEEEFVLEPLAYEMDPIVVPEGYVFVLGDNRNNSFDSHNWGPLPVENIVGRSMLRYWPPSKVSDIGYKRPSENSSFAIS	369

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach12g00209	369	FunFam	Peptidase/ serine-type peptidase	215	346	-	-
	Bach12g00209	369	ProSitePatterns	Signal peptidases I serine active site.	215	222	IPR019756	GO:0004252\|GO:0016020
	Bach12g00209	369	ProSitePatterns	Signal peptidases I signature 3.	314	327	IPR019758	GO:0004252\|GO:0016020
	Bach12g00209	369	Pfam	Signal peptidase, peptidase S26	190	347	IPR019533	GO:0004252\|GO:0006465
	Bach12g00209	369	Gene3D	Umud Fragment, subunit A	203	359	-	-
	Bach12g00209	369	PANTHER	SIGNAL PEPTIDASE I	126	353	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Bach12g00209	369	CDD	S26_SPase_I	209	341	IPR019533	GO:0004252\|GO:0006465
	Bach12g00209	369	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	309	328	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Bach12g00209	369	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	206	222	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Bach12g00209	369	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	265	277	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Bach12g00209	369	NCBIfam	signal peptidase I	192	348	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Bach12g00209	369	SUPERFAMILY	LexA/Signal peptidase	204	355	IPR036286	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach12g00209	Bach-Chr12	1429801	1431801	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach12g00209	218	348	MADS-box Gene Family	AT1G29960	34.586	7.36e-14	65.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach12g00209	K03100		-	zju:107420354	511.531

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bach12g00209	12	1429801	1431801	Bach12g00209	12	1429801	1431801	ECH